miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
21328570 NC_003982.1 Equine rhinitis A virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15470 + 240 90 24 -26.8 5' arm      3' arm
15472 + 3062 90 23 -23.5 NP_653075 5' arm      3' arm
15471 + 1648 84 21 -25.2 NP_653075 5' arm      3' arm
15473 + 3554 89 20.5 -26.3 NP_653076 5' arm      3' arm
15475 + 6897 89 21.5 -22.5 NP_653075 5' arm      3' arm
15474 + 6200 82 20 -20.5 NP_653075 5' arm      3' arm
15476 + 7009 88 19 -22 NP_653076 5' arm      3' arm
15478 - 3150 88 22 -21.6 NP_653075 5' arm      3' arm
15477 - 680 90 20.5 -19.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.