miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20428615 NC_003746.1 Rice yellow stunt virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15082 - 7466 87 23.5 -23.9 NP_620501 5' arm      3' arm
15080 + 5692 86 20.5 -25.3 NP_620500 5' arm      3' arm
15081 + 12865 89 22.5 -24.8 NP_620502 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.