miRNA display CGI


Results 1 - 17 of 17 are showing below:
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GenBank Identifier RefSeq Acc. Name
62326809 NC_006947.1 Karshi virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31962 + 1613 76 20 -23.2 YP_224133 5' arm      3' arm
31963 + 3232 80 19.5 -21.3 YP_224133 5' arm      3' arm
31964 + 5024 90 20 -26.1 YP_224133 5' arm      3' arm
31965 + 6024 90 20.5 -21.8 YP_224133 5' arm      3' arm
31966 + 6170 89 19.5 -25.1 YP_224133 5' arm      3' arm
31967 + 6512 90 22.5 -27.9 YP_224133 5' arm      3' arm
31968 + 7446 89 23.5 -19.9 YP_224133 5' arm      3' arm
31969 + 8108 90 19 -20 YP_224133 5' arm      3' arm
31970 + 9017 87 23 -22 YP_224133 5' arm      3' arm
31971 + 9731 81 19.5 -26.9 YP_224133 5' arm      3' arm
31972 + 10175 88 20 -22.8 YP_224133 5' arm      3' arm
31973 - 1114 89 20 -19.7 YP_224133 5' arm      3' arm
31974 - 3150 87 19 -23.6 YP_224133 5' arm      3' arm
31975 - 5111 86 19.5 -25.07 YP_224133 5' arm      3' arm
31976 - 10262 88 21 -26.1 YP_224133 5' arm      3' arm
31977 - 10358 87 21.5 -21.8 5' arm      3' arm
31978 - 10631 88 21 -29.1 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.