miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630525 NC_001902.1 Methanobacterium phage psiM2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7430 + 67 90 23.5 -27.1 5' arm      3' arm
7441 - 11304 89 20 -20.6 NP_046969 5' arm      3' arm
7440 - 8591 86 25 -28.6 NP_046966 5' arm      3' arm
7443 - 19017 90 20.5 -23.5 NP_046978 5' arm      3' arm
7442 - 18389 89 21 -25.9 NP_046977 5' arm      3' arm
7445 - 26049 80 19 -29.7 5' arm      3' arm
7444 - 25694 84 23.5 -36.2 NP_046986 5' arm      3' arm
7438 + 24975 88 20.5 -22.9 5' arm      3' arm
7436 + 21658 89 21 -23 NP_046981 5' arm      3' arm
7437 + 21997 89 21.5 -27.8 NP_046982 5' arm      3' arm
7435 + 19425 88 23 -25.4 NP_046978 5' arm      3' arm
7433 + 6048 78 19 -25.4 NP_046964 5' arm      3' arm
7434 + 6147 88 21 -22 NP_046964 5' arm      3' arm
7432 + 3564 86 19 -19.5 NP_046961 5' arm      3' arm
7431 + 940 89 22 -27.4 NP_597860 5' arm      3' arm
7439 - 2808 90 30 -23.3 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.