miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30146791 NC_004755.1 Sugarcane streak Reunion virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21097 - 2519 89 19.5 -27.6 NP_840053 5' arm      3' arm
21096 - 1570 90 19.5 -21.2 NP_840052 5' arm      3' arm
21095 - 1110 87 19 -21 NP_840051 5' arm      3' arm
21094 - 791 89 21 -19.6 NP_840051 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.