miRNA display CGI


Results 1 - 20 of 91 are showing below:
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GenBank Identifier RefSeq Acc. Name
17158105 NC_003225.1 Shrimp white spot syndrome virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11751 + 1946 90 23.5 -20.4 NP_477530 5' arm      3' arm
11752 + 8985 87 26.5 -27.5 NP_477547 5' arm      3' arm
11753 + 27575 75 23.5 -24.9 NP_477582 5' arm      3' arm
11754 + 27888 75 23.5 -24.9 NP_477584 5' arm      3' arm
11755 + 41019 90 22.5 -23.8 NP_477609 5' arm      3' arm
11756 + 44993 85 19.5 -24.5 NP_477613 5' arm      3' arm
11757 + 84027 89 27.5 -28.8 NP_477683 5' arm      3' arm
11758 + 91973 90 25.5 -20 5' arm      3' arm
11759 + 92226 90 25.5 -20.8 5' arm      3' arm
11760 + 94365 90 20 -23.6 5' arm      3' arm
11761 + 100738 87 19 -22.2 NP_477716 5' arm      3' arm
11762 + 111856 87 19 -21.4 NP_477731 5' arm      3' arm
11763 + 126988 90 22 -27.6 5' arm      3' arm
11764 + 136681 90 24 -22.3 5' arm      3' arm
11765 + 136936 90 24 -22.3 5' arm      3' arm
11766 + 137109 89 19 -19.6 5' arm      3' arm
11767 + 146157 89 21 -24.9 NP_477782 5' arm      3' arm
11768 + 147343 89 23.5 -23.9 NP_477787 5' arm      3' arm
11769 + 152088 90 27 -22 NP_477796 5' arm      3' arm
11770 + 158597 89 25 -24.6 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.