Results 1 - 11 of 11 are showing below:
Show page:
<< Previous Page | Next Page >>
| Acc. No. | Name | Perfect MFE.* | RefSeq Acc. | strand |
Start Position
|
R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | + | 157427 | 0.66 | 0.999871 |
|
Target: 5'- --cAGAaCGGCGGCG-GGGGUGc -3' miRNA: 3'- acaUUUaGCCGUCGCaUCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | + | 157288 | 0.67 | 0.999528 |
|
Target: 5'- gGUuGAUCuGGCGGCGcAGGGa- -3' miRNA: 3'- aCAuUUAG-CCGUCGCaUCCCau -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 148789 | 1.01 | 0.055033 |
|
Target: 5'- aUGUAAAUCGGCAGCGUAGGGUAc -3' miRNA: 3'- -ACAUUUAGCCGUCGCAUCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 136612 | 0.66 | 0.999903 |
|
Target: 5'- -------gGGCcGCGUAGGGUAg -3' miRNA: 3'- acauuuagCCGuCGCAUCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 125573 | 0.71 | 0.98726 |
|
Target: 5'- --gAGGUgGGCAGCGUggucAGGGUGg -3' miRNA: 3'- acaUUUAgCCGUCGCA----UCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 108018 | 0.66 | 0.999778 |
|
Target: 5'- cGUAGAagagCGGCGGCGguugcgcccGGGUGa -3' miRNA: 3'- aCAUUUa---GCCGUCGCau-------CCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 102075 | 0.71 | 0.988908 |
|
Target: 5'- --aAAGUCGGaccgaggcCGGCGUGGGGUGa -3' miRNA: 3'- acaUUUAGCC--------GUCGCAUCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | + | 63590 | 0.68 | 0.999063 |
|
Target: 5'- cGUGGcucucCGGCGGCGccgGGGGUGg -3' miRNA: 3'- aCAUUua---GCCGUCGCa--UCCCAU- -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | + | 52869 | 0.67 | 0.999249 |
|
Target: 5'- aGUagGAGUCGGCGGCGgcGGc-- -3' miRNA: 3'- aCA--UUUAGCCGUCGCauCCcau -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | + | 52611 | 0.67 | 0.999528 |
|
Target: 5'- --gGAAggCGGCAGCGUAGGc-- -3' miRNA: 3'- acaUUUa-GCCGUCGCAUCCcau -5' |
|||||||
| MIMAT0003425 | ebv-miR-BART14-5p | -45.7 | NC_007605.1 | - | 40018 | 0.69 | 0.996913 |
|
Target: 5'- --gGGAUCGGCGGgGcUGGGGUc -3' miRNA: 3'- acaUUUAGCCGUCgC-AUCCCAu -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home