miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
1032	5'	-41.5	NC_000924.1	+	54756	0.66	0.999992
	Target:  5'- aAACUGGCGGcaaaGUGGACgacaguAACAAc- -3' miRNA:   3'- -UUGACCGCCaa--UAUUUGau----UUGUUua -5'
1032	5'	-41.5	NC_000924.1	+	26441	0.66	0.999987
	Target:  5'- cGCUGGUGGaUUAaGGACgguGGCAGAg -3' miRNA:   3'- uUGACCGCC-AAUaUUUGau-UUGUUUa -5'
1032	5'	-41.5	NC_000924.1	+	53536	0.66	0.999982
	Target:  5'- cGCUGGCGG--GUGAAUUGuuCGAu- -3' miRNA:   3'- uUGACCGCCaaUAUUUGAUuuGUUua -5'
1032	5'	-41.5	NC_000924.1	+	20251	0.66	0.999982
	Target:  5'- cGCUGGgGGgcAUGGGCg--GCAAAUa -3' miRNA:   3'- uUGACCgCCaaUAUUUGauuUGUUUA- -5'
1032	5'	-41.5	NC_000924.1	+	46085	0.66	0.999974
	Target:  5'- uGGCUGGCGGacgcUGGGCUGAguuccauacgGCAAGg -3' miRNA:   3'- -UUGACCGCCaau-AUUUGAUU----------UGUUUa -5'
1032	5'	-41.5	NC_000924.1	+	49611	0.7	0.998606
	Target:  5'- uGCUGGCGGUgu--GGCUAGAaAGGUg -3' miRNA:   3'- uUGACCGCCAauauUUGAUUUgUUUA- -5'
1032	5'	-41.5	NC_000924.1	+	61075	0.76	0.940766
	Target:  5'- uAGCUGGCGGUcgggUGUcAACUGAGCcAAAUa -3' miRNA:   3'- -UUGACCGCCA----AUAuUUGAUUUG-UUUA- -5'
1032	5'	-41.5	NC_000924.1	+	61134	1.05	0.046337
	Target:  5'- uAACUGGCGGUUAUAAACUAAACAAAUa -3' miRNA:   3'- -UUGACCGCCAAUAUUUGAUUUGUUUA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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