Results 81 - 83 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10536 | 3' | -54.8 | NC_002687.1 | + | 64070 | 0.69 | 0.939599 |
Target: 5'- gACcGCGAa-ACGUGGAGAGCcGUGCUg -3' miRNA: 3'- -UGcCGUUgaUGUACCUCUCGuCGCGG- -5' |
|||||||
10536 | 3' | -54.8 | NC_002687.1 | + | 237091 | 0.69 | 0.939599 |
Target: 5'- cGCGGCuuCcGCGgaugaUGGAcGAauGCAGCGCCu -3' miRNA: 3'- -UGCCGuuGaUGU-----ACCU-CU--CGUCGCGG- -5' |
|||||||
10536 | 3' | -54.8 | NC_002687.1 | + | 138336 | 0.78 | 0.53864 |
Target: 5'- cGCGGCuGCUGCuGUGGAGAGgCcGCGUCg -3' miRNA: 3'- -UGCCGuUGAUG-UACCUCUC-GuCGCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home