Results 21 - 40 of 97 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 52766 | 0.76 | 0.982914 |
Target: 5'- -gCACGAUAaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 52831 | 0.76 | 0.982914 |
Target: 5'- -gCACGAUAaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 52911 | 0.76 | 0.982914 |
Target: 5'- -gCACGAUAaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53019 | 0.76 | 0.982914 |
Target: 5'- -gCACGAUAaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53083 | 0.77 | 0.980852 |
Target: 5'- -gCACaAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGcUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53148 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53213 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53342 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53406 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53471 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53535 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53600 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53665 | 0.77 | 0.980852 |
Target: 5'- -gCACaAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGcUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53729 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53794 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53858 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 53921 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 54002 | 0.76 | 0.982914 |
Target: 5'- -gCACGAUAaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 54066 | 0.77 | 0.980852 |
Target: 5'- -gCACaAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGcUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 54131 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home