Results 61 - 80 of 97 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228580 | 0.79 | 0.935061 |
Target: 5'- -gCACGAUAaAUCGUGUUcCGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAuGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228645 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228710 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228775 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228838 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228903 | 0.8 | 0.906735 |
Target: 5'- -gCACGAcaaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUauaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 228967 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229032 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229097 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229161 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229226 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229291 | 0.67 | 0.999998 |
Target: 5'- -gCACGAcaaAUCGUaUUACGUUGCAg -3' miRNA: 3'- uaGUGCUauaUAGCAcAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229355 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229377 | 0.67 | 0.999998 |
Target: 5'- cUCACcGUGcuaccugcaccaCGUGUUACGUCGCAa -3' miRNA: 3'- uAGUGcUAUaua---------GCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229420 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229485 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229507 | 0.99 | 0.181632 |
Target: 5'- cAUCACGAUAaAUCGUGUUACGUCGCAa -3' miRNA: 3'- -UAGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229550 | 0.89 | 0.523039 |
Target: 5'- -gCACGAUAaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUAUaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229615 | 0.8 | 0.906735 |
Target: 5'- -gCACGAcaaAUCGUGUUACGUUGCAg -3' miRNA: 3'- uaGUGCUauaUAGCACAAUGCAGCGU- -5' |
|||||||
10544 | 5' | -46.2 | NC_002687.1 | + | 229628 | 0.99 | 0.181632 |
Target: 5'- cAUCACGAUAaAUCGUGUUACGUCGCAa -3' miRNA: 3'- -UAGUGCUAUaUAGCACAAUGCAGCGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home