Results 1 - 20 of 76 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 190043 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 187200 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 187437 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 188147 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 188386 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 188859 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 189095 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 189332 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 189807 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 186963 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 186726 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 186253 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 210316 | 0.66 | 0.943723 |
Target: 5'- cACCACCGGCaCCACgGGcacauaCGGCa -3' miRNA: 3'- -UGGUGGCCG-GGUGgUCuucucaGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 261604 | 0.66 | 0.943723 |
Target: 5'- cCCGCCGGCaagaugagCugCAu--GGGUCAGCa -3' miRNA: 3'- uGGUGGCCGg-------GugGUcuuCUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 202209 | 0.66 | 0.939377 |
Target: 5'- aGCCACUGuGCcaagCCGCCGcuGGAGUCcGCg -3' miRNA: 3'- -UGGUGGC-CG----GGUGGUcuUCUCAGuCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 225217 | 0.66 | 0.939377 |
Target: 5'- gACCguGCCGGCgCCGCCGc----GUCGGCg -3' miRNA: 3'- -UGG--UGGCCG-GGUGGUcuucuCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 86097 | 0.66 | 0.939377 |
Target: 5'- cCCACgaGGCCagcgggGCCAGcGGGGcCAGCg -3' miRNA: 3'- uGGUGg-CCGGg-----UGGUCuUCUCaGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 296953 | 0.67 | 0.934822 |
Target: 5'- uCCGCCuGCUgCACCGGggG-GUgAGCu -3' miRNA: 3'- uGGUGGcCGG-GUGGUCuuCuCAgUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 145835 | 0.67 | 0.919886 |
Target: 5'- uGCuCGCCGaggcGCgCGCCGGGGcgcuGGGUCAGCu -3' miRNA: 3'- -UG-GUGGC----CGgGUGGUCUU----CUCAGUCG- -5' |
|||||||
10561 | 5' | -57.8 | NC_002687.1 | + | 185780 | 0.67 | 0.914484 |
Target: 5'- uCCAUCGGUCCuCC-GAA-AGUCGGCg -3' miRNA: 3'- uGGUGGCCGGGuGGuCUUcUCAGUCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home