miRNA display CGI

Results 81 - 88 of 88 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
10592	5'	-52	NC_002687.1	+	321907	0.7	0.985927
	Target:  5'- gACCGACAGAuCGACcaACGCGCUAa-- -3' miRNA:   3'- -UGGCUGUUU-GCUGccUGUGCGGUaac -5'
10592	5'	-52	NC_002687.1	+	322852	0.66	0.999338
	Target:  5'- gAUCGACgGAGCGACGGcUGCGCgAUc- -3' miRNA:   3'- -UGGCUG-UUUGCUGCCuGUGCGgUAac -5'
10592	5'	-52	NC_002687.1	+	323658	0.99	0.062611
	Target:  5'- cACCGACAAACGACGGGCACGCCAc-- -3' miRNA:   3'- -UGGCUGUUUGCUGCCUGUGCGGUaac -5'
10592	5'	-52	NC_002687.1	+	324042	0.99	0.062611
	Target:  5'- cACCGACAAACGACGGGCACGCCAc-- -3' miRNA:   3'- -UGGCUGUUUGCUGCCUGUGCGGUaac -5'
10592	5'	-52	NC_002687.1	+	324425	0.99	0.062611
	Target:  5'- cACCGACAAACGACGGGCACGCCAc-- -3' miRNA:   3'- -UGGCUGUUUGCUGCCUGUGCGGUaac -5'
10592	5'	-52	NC_002687.1	+	324809	0.99	0.062611
	Target:  5'- cACCGACAAACGACGGGCACGCCAc-- -3' miRNA:   3'- -UGGCUGUUUGCUGCCUGUGCGGUaac -5'
10592	5'	-52	NC_002687.1	+	325177	1.08	0.020024
	Target:  5'- cACCGACAAACGACGGACACGCCAUUGc -3' miRNA:   3'- -UGGCUGUUUGCUGCCUGUGCGGUAAC- -5'
10592	5'	-52	NC_002687.1	+	329050	0.66	0.998598
	Target:  5'- gGCCGGa----GACGGACGCGCgGc-- -3' miRNA:   3'- -UGGCUguuugCUGCCUGUGCGgUaac -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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