Results 81 - 88 of 88 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 114750 | 0.67 | 0.88338 |
|
Target: 5'- cGGCGCCGcccgCCGGCgccGGUccUCGGCGg- -3' miRNA: 3'- uUUGCGGCua--GGCCG---UCA--AGCCGUga -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 55258 | 0.67 | 0.890168 |
|
Target: 5'- aGGACGCCGAagagCCGGgGGg-CGGCGgUg -3' miRNA: 3'- -UUUGCGGCUa---GGCCgUCaaGCCGUgA- -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 108308 | 0.67 | 0.880603 |
|
Target: 5'- --cCGuuGcgCCGGCGGUgggucuuggacggCGGCGCa -3' miRNA: 3'- uuuGCggCuaGGCCGUCAa------------GCCGUGa -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 108378 | 0.67 | 0.879201 |
|
Target: 5'- cGGGCGCCgGAgcggggagcggaggcUCCGGCGG--CGGCGCc -3' miRNA: 3'- -UUUGCGG-CU---------------AGGCCGUCaaGCCGUGa -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 137389 | 0.67 | 0.876373 |
|
Target: 5'- cGACGCgGGUCCGGUcuGUcCGGCGu- -3' miRNA: 3'- uUUGCGgCUAGGCCGu-CAaGCCGUga -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 66042 | 0.67 | 0.876373 |
|
Target: 5'- --uCGUCGggCCGGCAGcggCGGC-CUg -3' miRNA: 3'- uuuGCGGCuaGGCCGUCaa-GCCGuGA- -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 126252 | 0.67 | 0.869153 |
|
Target: 5'- uGGCGCgCGAggUCGGCGGcuggcuggCGGCGCUg -3' miRNA: 3'- uUUGCG-GCUa-GGCCGUCaa------GCCGUGA- -5' |
|||||||
| 10706 | 3' | -56.5 | NC_002794.1 | + | 44539 | 0.68 | 0.838246 |
|
Target: 5'- -cGCGCCGucgucgucgCCGGCGG--CGGCGCc -3' miRNA: 3'- uuUGCGGCua-------GGCCGUCaaGCCGUGa -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home