Results 101 - 120 of 314 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 31023 | 0.67 | 0.981259 |
Target: 5'- gCCucCUCCGAGcacagggccgacagaUAgGGCAGCGgcACGGCg -3' miRNA: 3'- -GGucGAGGUUC---------------AUgCCGUCGU--UGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 75610 | 0.67 | 0.981259 |
Target: 5'- aCGGCUCCGugaucccggucuGGUacccuuucucgcuacACacgaGCGGCAGCGGCg -3' miRNA: 3'- gGUCGAGGU------------UCA---------------UGc---CGUCGUUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 42630 | 0.66 | 0.982283 |
Target: 5'- aCCGcGCUCUcacagcgGAGUcGCGGCcgaAGCcGACGGCg -3' miRNA: 3'- -GGU-CGAGG-------UUCA-UGCCG---UCG-UUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 150716 | 0.67 | 0.980409 |
Target: 5'- aUCGaCUUCGAcGUGCGGCGGCuGACcGCg -3' miRNA: 3'- -GGUcGAGGUU-CAUGCCGUCG-UUGuCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 38628 | 0.67 | 0.980409 |
Target: 5'- cCCGaCUCgCcGGUGCGGC-GCGACGGa -3' miRNA: 3'- -GGUcGAG-GuUCAUGCCGuCGUUGUCg -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 138748 | 0.66 | 0.982482 |
Target: 5'- cCCGGCccuccgggggCCGAGUcGCGGCGGU--CGGUg -3' miRNA: 3'- -GGUCGa---------GGUUCA-UGCCGUCGuuGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 136328 | 0.66 | 0.982482 |
Target: 5'- gCAGCUCUucu--CGGUGGCGGgcCAGCg -3' miRNA: 3'- gGUCGAGGuucauGCCGUCGUU--GUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 176961 | 0.66 | 0.984386 |
Target: 5'- gCAGCgggaccUCCGGGUAuccCGGgAGUAcCAGCg -3' miRNA: 3'- gGUCG------AGGUUCAU---GCCgUCGUuGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 110640 | 0.66 | 0.985961 |
Target: 5'- gCGGCggggUCGGGUuucuccgGCGGCuGCAgacaguGCAGCa -3' miRNA: 3'- gGUCGa---GGUUCA-------UGCCGuCGU------UGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 151214 | 0.66 | 0.984386 |
Target: 5'- gCCGGCUaCCGGGucUugGGCcagGGCuacCGGCu -3' miRNA: 3'- -GGUCGA-GGUUC--AugCCG---UCGuu-GUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 122823 | 0.66 | 0.984386 |
Target: 5'- aCCuGUUCUucGaGCGGgAGCGGCAcGCg -3' miRNA: 3'- -GGuCGAGGuuCaUGCCgUCGUUGU-CG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 117933 | 0.66 | 0.984386 |
Target: 5'- cCCgAGgUCCAGGUcGCGGacgaAGU-ACAGCa -3' miRNA: 3'- -GG-UCgAGGUUCA-UGCCg---UCGuUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 58062 | 0.66 | 0.984386 |
Target: 5'- gCGGCcCCG---GCGGCGGCGggacggGCGGCc -3' miRNA: 3'- gGUCGaGGUucaUGCCGUCGU------UGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 68549 | 0.66 | 0.984386 |
Target: 5'- gCGGCcgaCAAGcUGCGGguGUcgccGACGGCg -3' miRNA: 3'- gGUCGag-GUUC-AUGCCguCG----UUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 31773 | 0.66 | 0.984203 |
Target: 5'- aUguGCUCCGGGgucaGCGGUAGCccGAacucgauguacuuCAGCa -3' miRNA: 3'- -GguCGAGGUUCa---UGCCGUCG--UU-------------GUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 4432 | 0.66 | 0.984386 |
Target: 5'- cCCaAGCUCCAAGcuucCGGCcGauacGCGGCg -3' miRNA: 3'- -GG-UCGAGGUUCau--GCCGuCgu--UGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 152557 | 0.66 | 0.984386 |
Target: 5'- -gAGUgCCAGGaGCGGCGcuucaccgccGCGGCGGCc -3' miRNA: 3'- ggUCGaGGUUCaUGCCGU----------CGUUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 195621 | 0.66 | 0.982482 |
Target: 5'- uCCGGC-CCAA--ACGGCcGGCGACgacgAGCc -3' miRNA: 3'- -GGUCGaGGUUcaUGCCG-UCGUUG----UCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 12518 | 0.66 | 0.983832 |
Target: 5'- aCCGGCggCUggGUggauuggaaggaacGCGGCGcGC-ACGGCu -3' miRNA: 3'- -GGUCGa-GGuuCA--------------UGCCGU-CGuUGUCG- -5' |
|||||||
10711 | 3' | -52.8 | NC_002794.1 | + | 105284 | 0.66 | 0.982482 |
Target: 5'- gCCAGCguugCuCGGGguccCGGCucAGCAGCAGg -3' miRNA: 3'- -GGUCGa---G-GUUCau--GCCG--UCGUUGUCg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home