Results 41 - 60 of 98 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 148108 | 0.68 | 0.973915 |
Target: 5'- -cGCUCAAgaaGCgACggucggugucgggcGCGGGGCCGCc -3' miRNA: 3'- uuCGAGUUaa-UGgUGa-------------UGCUCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 121233 | 0.68 | 0.97551 |
Target: 5'- -cGCUaCAGUcGCCGCUGcCGccGCCGCc -3' miRNA: 3'- uuCGA-GUUAaUGGUGAU-GCucCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 85389 | 0.68 | 0.978007 |
Target: 5'- -uGCUCAcg-GCCA----GAGGCCGCg -3' miRNA: 3'- uuCGAGUuaaUGGUgaugCUCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 66832 | 0.68 | 0.978007 |
Target: 5'- cGGCgcgacucCGGgcGCCGCcgucggcgcgGCGAGGCCGCg -3' miRNA: 3'- uUCGa------GUUaaUGGUGa---------UGCUCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 116805 | 0.68 | 0.978007 |
Target: 5'- cGGCUCGGgcGCCGuaGCGcGGGUCGCu -3' miRNA: 3'- uUCGAGUUaaUGGUgaUGC-UCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 86955 | 0.67 | 0.980312 |
Target: 5'- cGAGCgUCGAcguCCGCUGCGGcGaGCUGCg -3' miRNA: 3'- -UUCG-AGUUaauGGUGAUGCU-C-CGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 114124 | 0.67 | 0.980312 |
Target: 5'- cAGCUCGuucUUGCCGCcgGCcAGGgCGCg -3' miRNA: 3'- uUCGAGUu--AAUGGUGa-UGcUCCgGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 182175 | 0.67 | 0.982432 |
Target: 5'- gGAGCggcugUACCAUaACGGGGCCucgGCg -3' miRNA: 3'- -UUCGaguuaAUGGUGaUGCUCCGG---CG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 134693 | 0.67 | 0.982432 |
Target: 5'- uGGCUCGAccGCCuCUG-GGGGCCGg -3' miRNA: 3'- uUCGAGUUaaUGGuGAUgCUCCGGCg -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 189034 | 0.67 | 0.982432 |
Target: 5'- -cGCUCGAccGCCAgcgGCG-GGCUGCg -3' miRNA: 3'- uuCGAGUUaaUGGUga-UGCuCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 120194 | 0.67 | 0.982432 |
Target: 5'- cGGUUCAAggGCaCGa-GCGGGGUCGCg -3' miRNA: 3'- uUCGAGUUaaUG-GUgaUGCUCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 15390 | 0.67 | 0.982432 |
Target: 5'- cGAGUUCA---ACCAC-ACGcaccuGGCCGCc -3' miRNA: 3'- -UUCGAGUuaaUGGUGaUGCu----CCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 111592 | 0.67 | 0.98323 |
Target: 5'- cAGCUCGAgcggggugaucuCCcagGCcgGCGGGGCCGCc -3' miRNA: 3'- uUCGAGUUaau---------GG---UGa-UGCUCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 99511 | 0.67 | 0.984188 |
Target: 5'- uGAGCaccgucacguuuuUCAAcccgUAUCugUGCG-GGCCGCg -3' miRNA: 3'- -UUCG-------------AGUUa---AUGGugAUGCuCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 184806 | 0.67 | 0.984375 |
Target: 5'- cGGGCUCAGcaGCguC-ACGGGGCaCGCg -3' miRNA: 3'- -UUCGAGUUaaUGguGaUGCUCCG-GCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 115321 | 0.67 | 0.984375 |
Target: 5'- -cGCaCGGUcGCCGCgGCGuccGGGCCGCu -3' miRNA: 3'- uuCGaGUUAaUGGUGaUGC---UCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 127354 | 0.67 | 0.984375 |
Target: 5'- -cGCUCGcg-GCgGCgGCGcGGCCGCu -3' miRNA: 3'- uuCGAGUuaaUGgUGaUGCuCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 113307 | 0.67 | 0.984375 |
Target: 5'- -cGCUCGu---CCGCUACccgccGGGCCGUc -3' miRNA: 3'- uuCGAGUuaauGGUGAUGc----UCCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 110319 | 0.67 | 0.984375 |
Target: 5'- -cGCUC----GCCGCcGCGAcGCCGCg -3' miRNA: 3'- uuCGAGuuaaUGGUGaUGCUcCGGCG- -5' |
|||||||
10765 | 5' | -51.5 | NC_002794.1 | + | 146693 | 0.67 | 0.98615 |
Target: 5'- -cGCUCGAg-GCCgACUGCGGGaGCUGg -3' miRNA: 3'- uuCGAGUUaaUGG-UGAUGCUC-CGGCg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home