Results 41 - 60 of 129 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 61714 | 0.66 | 0.986507 |
Target: 5'- gGAAGCUCGGuccguguugcuggccGugGcCGCGCGGAuGGc -3' miRNA: 3'- gCUUCGGGUU---------------CugUuGCGCGCCUuCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 101440 | 0.66 | 0.987289 |
Target: 5'- uGggGCgCGcccGACAACcuggaggccuacgGCGCGGAGGa -3' miRNA: 3'- gCuuCGgGUu--CUGUUG-------------CGCGCCUUCc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 116431 | 0.66 | 0.987441 |
Target: 5'- -aGGGCCCGGcGGCGGCggcggcgaccgGCGCGGAGa- -3' miRNA: 3'- gcUUCGGGUU-CUGUUG-----------CGCGCCUUcc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 37715 | 0.66 | 0.987441 |
Target: 5'- --cAGCUCGcGGCGACGaGgGGAAGGu -3' miRNA: 3'- gcuUCGGGUuCUGUUGCgCgCCUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 737 | 0.66 | 0.987441 |
Target: 5'- ---cGCCCGcGGC-GCGCGCGGGc-- -3' miRNA: 3'- gcuuCGGGUuCUGuUGCGCGCCUucc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 71850 | 0.66 | 0.98412 |
Target: 5'- uGAAGC---GGGCGGC-CGCGGAAGa -3' miRNA: 3'- gCUUCGgguUCUGUUGcGCGCCUUCc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 91337 | 0.66 | 0.98412 |
Target: 5'- uGAGGCgCGGGugG-CGCG-GGAAGa -3' miRNA: 3'- gCUUCGgGUUCugUuGCGCgCCUUCc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 42572 | 0.66 | 0.980171 |
Target: 5'- cCGucGCCCGAGACGcagGC-CGgGGAGcGGc -3' miRNA: 3'- -GCuuCGGGUUCUGU---UGcGCgCCUU-CC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 101723 | 0.66 | 0.980171 |
Target: 5'- gGAAgGUCCGAccgcGGCGGCGCuggacgGUGGggGGg -3' miRNA: 3'- gCUU-CGGGUU----CUGUUGCG------CGCCuuCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 65861 | 0.66 | 0.980171 |
Target: 5'- uCGAacGGCCCcGGA--GCGUGCGGGucGGc -3' miRNA: 3'- -GCU--UCGGGuUCUguUGCGCGCCUu-CC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 91426 | 0.66 | 0.980171 |
Target: 5'- --cGGCCC-GGACGcCGcCGCGGgcGGc -3' miRNA: 3'- gcuUCGGGuUCUGUuGC-GCGCCuuCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 158918 | 0.66 | 0.981628 |
Target: 5'- aGaAAGUCCGcgucgcgcggcggcAGGCAGuCGCGCaGGAGGa -3' miRNA: 3'- gC-UUCGGGU--------------UCUGUU-GCGCGcCUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 137801 | 0.66 | 0.982228 |
Target: 5'- uCGGcGGCCCc-GGCGGCG-GCGGGAcGGg -3' miRNA: 3'- -GCU-UCGGGuuCUGUUGCgCGCCUU-CC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 78579 | 0.66 | 0.981628 |
Target: 5'- gCGAcGCCCugcgcGGACAGCuGCGgcgugucgagcgacUGGAAGGu -3' miRNA: 3'- -GCUuCGGGu----UCUGUUG-CGC--------------GCCUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 11176 | 0.66 | 0.982228 |
Target: 5'- --cAGUaCCAGGACGcCG-GCGGAGGGu -3' miRNA: 3'- gcuUCG-GGUUCUGUuGCgCGCCUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 94587 | 0.66 | 0.982228 |
Target: 5'- cCGgcGCCgGuGGCGGCgGCG-GGGAGGa -3' miRNA: 3'- -GCuuCGGgUuCUGUUG-CGCgCCUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 10476 | 0.66 | 0.982228 |
Target: 5'- gCGAGGCCagccagAAGACgAGgGCGCGGGc-- -3' miRNA: 3'- -GCUUCGGg-----UUCUG-UUgCGCGCCUucc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 13977 | 0.66 | 0.982228 |
Target: 5'- cCGggGUCgCGaacAGGCGACaGCGCGGGu-- -3' miRNA: 3'- -GCuuCGG-GU---UCUGUUG-CGCGCCUucc -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 183060 | 0.66 | 0.98412 |
Target: 5'- aCGAucGGCCCGGGGCc-CGUGCucGAGGu -3' miRNA: 3'- -GCU--UCGGGUUCUGuuGCGCGccUUCC- -5' |
|||||||
10918 | 5' | -53.6 | NC_002794.1 | + | 74317 | 0.66 | 0.98412 |
Target: 5'- aCGGAGCCCGGuGACGACGagacgaGCuucGGGa -3' miRNA: 3'- -GCUUCGGGUU-CUGUUGCg-----CGccuUCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home