Results 61 - 67 of 67 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position
|
R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 48540 | 0.67 | 0.954254 |
|
Target: 5'- -gCUCGG-GUCGgccgACCacucCGCCGGCCGc -3' miRNA: 3'- agGAGCCuUAGCa---UGGa---GCGGUUGGC- -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 47483 | 0.67 | 0.961548 |
|
Target: 5'- gCC-CGGggUCGaGCUUCaCCAGCUGc -3' miRNA: 3'- aGGaGCCuuAGCaUGGAGcGGUUGGC- -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 43173 | 0.67 | 0.967994 |
|
Target: 5'- gCgaCGGAAUagcgGUugCgcgCGCCGACCGg -3' miRNA: 3'- aGgaGCCUUAg---CAugGa--GCGGUUGGC- -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 40597 | 0.67 | 0.964875 |
|
Target: 5'- cUCCUCcGAGUCGUcGCCggCGuCCGACUc -3' miRNA: 3'- -AGGAGcCUUAGCA-UGGa-GC-GGUUGGc -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 21568 | 0.66 | 0.976165 |
|
Target: 5'- cUCCUCGGGuUCGUcg--UGCgCGACCGg -3' miRNA: 3'- -AGGAGCCUuAGCAuggaGCG-GUUGGC- -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 19285 | 0.67 | 0.964875 |
|
Target: 5'- cUCCUggccUGGAGccUCGUcGCgUCGCUGACCGc -3' miRNA: 3'- -AGGA----GCCUU--AGCA-UGgAGCGGUUGGC- -5' |
|||||||
| 10994 | 5' | -54.2 | NC_002794.1 | + | 12369 | 0.68 | 0.932109 |
|
Target: 5'- aCCUCGG---CGUG-CUCGCCuGCCGc -3' miRNA: 3'- aGGAGCCuuaGCAUgGAGCGGuUGGC- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home