Results 21 - 23 of 23 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
11042 | 5' | -55.5 | NC_002794.1 | + | 113753 | 0.7 | 0.775865 |
Target: 5'- cAGGCGCGCGAGGG---UGUCGGcaccUGUCg -3' miRNA: 3'- -UUCGCGUGCUUCUgcgACAGCC----ACAG- -5' |
|||||||
11042 | 5' | -55.5 | NC_002794.1 | + | 72206 | 0.71 | 0.73771 |
Target: 5'- cAGGCGCA-GcGGGCGCUGUCGGa--- -3' miRNA: 3'- -UUCGCGUgCuUCUGCGACAGCCacag -5' |
|||||||
11042 | 5' | -55.5 | NC_002794.1 | + | 2475 | 0.73 | 0.616754 |
Target: 5'- cAAGCGCGCGAGGGCGauc-CGGUGg- -3' miRNA: 3'- -UUCGCGUGCUUCUGCgacaGCCACag -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home