Results 61 - 80 of 155 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 55952 | 0.66 | 0.933704 |
Target: 5'- cGCAGCAGgaaCGgguagUAGuCGAGGuggauggcguAGCCGCGGg -3' miRNA: 3'- -UGUCGUC---GCa----GUC-GCUCC----------UUGGUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 109936 | 0.66 | 0.933704 |
Target: 5'- cCAGUucugGGgGUCAGgGAGG-GCCGgGGg -3' miRNA: 3'- uGUCG----UCgCAGUCgCUCCuUGGUgCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 100457 | 0.66 | 0.917973 |
Target: 5'- gGCGGCGGCGcCuucccgguGGCGGaGAACCugGa -3' miRNA: 3'- -UGUCGUCGCaG--------UCGCUcCUUGGugCc -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 115930 | 0.67 | 0.912853 |
Target: 5'- cGCGGCGGCGggcCGGCccgccgcgugucgccGGGGACCGUGGg -3' miRNA: 3'- -UGUCGUCGCa--GUCGc--------------UCCUUGGUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 45590 | 0.66 | 0.917973 |
Target: 5'- gGCAGCAGgGcCGG-GAacGGGACC-CGGa -3' miRNA: 3'- -UGUCGUCgCaGUCgCU--CCUUGGuGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 53617 | 0.67 | 0.912273 |
Target: 5'- cGCcGCAGCGUCGGacggaCGAGGucgGCCGagcCGGc -3' miRNA: 3'- -UGuCGUCGCAGUC-----GCUCCu--UGGU---GCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 63777 | 0.67 | 0.912273 |
Target: 5'- aACAGCugauCGUCgaAGUGcGGAACCGCGa -3' miRNA: 3'- -UGUCGuc--GCAG--UCGCuCCUUGGUGCc -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 115834 | 0.67 | 0.912273 |
Target: 5'- uCGGCGGgGccCGGCGGGcucGGGCCugGGa -3' miRNA: 3'- uGUCGUCgCa-GUCGCUC---CUUGGugCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 123321 | 0.67 | 0.912273 |
Target: 5'- aGCAGCAGgGgccgCAGCuGGGggUgGCGu -3' miRNA: 3'- -UGUCGUCgCa---GUCGcUCCuuGgUGCc -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 140189 | 0.67 | 0.906345 |
Target: 5'- gGCGaCGGCGUCGuCGAGGGgcgACC-CGGg -3' miRNA: 3'- -UGUcGUCGCAGUcGCUCCU---UGGuGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 71364 | 0.66 | 0.917973 |
Target: 5'- aGCAGguGCGgCAGCcgccccAGGAccuccuCCACGGu -3' miRNA: 3'- -UGUCguCGCaGUCGc-----UCCUu-----GGUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 182108 | 0.66 | 0.917973 |
Target: 5'- cGCGGUAGCGgaucCGGCGccagccGAACCGCGc -3' miRNA: 3'- -UGUCGUCGCa---GUCGCuc----CUUGGUGCc -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 182473 | 0.66 | 0.930723 |
Target: 5'- --cGCGGCGUCAGCaGAuacagucccaaGGGGCCggucagguacgcguaGCGGa -3' miRNA: 3'- uguCGUCGCAGUCG-CU-----------CCUUGG---------------UGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 101815 | 0.66 | 0.928689 |
Target: 5'- cGCAGCGGCG-CGccgugcGCGAGGccaUGCGGg -3' miRNA: 3'- -UGUCGUCGCaGU------CGCUCCuugGUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 21898 | 0.66 | 0.928689 |
Target: 5'- cGCGGCcuGCGUCGGUG-GuGGCgGCGGa -3' miRNA: 3'- -UGUCGu-CGCAGUCGCuCcUUGgUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 140028 | 0.66 | 0.928689 |
Target: 5'- cGCGGCccccGCGggCGGCG-GGAGaCACGGa -3' miRNA: 3'- -UGUCGu---CGCa-GUCGCuCCUUgGUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 136511 | 0.66 | 0.928689 |
Target: 5'- uCAGCAGCGg-GGCGAGGuAGagAUGGu -3' miRNA: 3'- uGUCGUCGCagUCGCUCC-UUggUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 137719 | 0.66 | 0.927659 |
Target: 5'- cCGGCaacuuggAGCGUCAgGCGAugggccgacgcuuGGAACgGCGGc -3' miRNA: 3'- uGUCG-------UCGCAGU-CGCU-------------CCUUGgUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 94149 | 0.66 | 0.923446 |
Target: 5'- cGCGGCGGCGcuggaCGGUGGGGGGg-ACGGg -3' miRNA: 3'- -UGUCGUCGCa----GUCGCUCCUUggUGCC- -5' |
|||||||
11093 | 5' | -56.3 | NC_002794.1 | + | 14495 | 0.66 | 0.923446 |
Target: 5'- cGCGGCGGCGgcccgcgcucgCGGCGcucguGGcgccgcucGGCCACGGc -3' miRNA: 3'- -UGUCGUCGCa----------GUCGCu----CC--------UUGGUGCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home