Results 41 - 60 of 145 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 18687 | 0.66 | 0.739181 |
Target: 5'- --cGCCGCcGUCuCCGGCACGGCg-- -3' miRNA: 3'- uucCGGUGcCAGuGGCUGUGCCGguu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 181364 | 0.66 | 0.739181 |
Target: 5'- -cGGCCcgguugAgGGUCACgGGCcCGGCCGu -3' miRNA: 3'- uuCCGG------UgCCAGUGgCUGuGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 185175 | 0.66 | 0.739181 |
Target: 5'- -cGGCgcggCGCGGUCGgcgcggUCGGCGCGGUCAu -3' miRNA: 3'- uuCCG----GUGCCAGU------GGCUGUGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 17420 | 0.66 | 0.748602 |
Target: 5'- -cGGCCaucGCGGUCuccgcgccGCCGGCGCucgGGCCc- -3' miRNA: 3'- uuCCGG---UGCCAG--------UGGCUGUG---CCGGuu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 94017 | 0.67 | 0.681101 |
Target: 5'- cGGGCCgGCGGguucCGCCGGCG-GGCCc- -3' miRNA: 3'- uUCCGG-UGCCa---GUGGCUGUgCCGGuu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 65997 | 0.67 | 0.681101 |
Target: 5'- uGGGCgGugauccCGG-CACCGAgGCGGCCGc -3' miRNA: 3'- uUCCGgU------GCCaGUGGCUgUGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 82575 | 0.67 | 0.675188 |
Target: 5'- cGAGGCCgACGc-CGCCGAgacggagacccucucCGCGGCCGAa -3' miRNA: 3'- -UUCCGG-UGCcaGUGGCU---------------GUGCCGGUU- -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 51344 | 0.67 | 0.680116 |
Target: 5'- -uGGaCCACGGcCAaagccgcCCGAgGCGGCCGc -3' miRNA: 3'- uuCC-GGUGCCaGU-------GGCUgUGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 111656 | 0.67 | 0.67124 |
Target: 5'- -cGGCCGCGGccaCGCCcgucgGAUACGGUCGu -3' miRNA: 3'- uuCCGGUGCCa--GUGG-----CUGUGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 149881 | 0.67 | 0.67124 |
Target: 5'- gGGGGUCugGGUCAUCGugAcccgggauCGGCUg- -3' miRNA: 3'- -UUCCGGugCCAGUGGCugU--------GCCGGuu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 188067 | 0.67 | 0.67124 |
Target: 5'- -cGGCCAgcGUCACCGuCGguuCGGCCAAg -3' miRNA: 3'- uuCCGGUgcCAGUGGCuGU---GCCGGUU- -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 78681 | 0.67 | 0.681101 |
Target: 5'- -cGGCCGcCGGcCgcaugugcgGCCGACACGGCg-- -3' miRNA: 3'- uuCCGGU-GCCaG---------UGGCUGUGCCGguu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 145468 | 0.67 | 0.681101 |
Target: 5'- -uGGa-GCGGUCGCCGAa--GGCCGAg -3' miRNA: 3'- uuCCggUGCCAGUGGCUgugCCGGUU- -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 376 | 0.67 | 0.681101 |
Target: 5'- -cGGCCGCGcGaUCcCCGGCACGcuGCCAc -3' miRNA: 3'- uuCCGGUGC-C-AGuGGCUGUGC--CGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 151605 | 0.67 | 0.681101 |
Target: 5'- cGGGcCCGCGGUUcCuCGGCugACGGCCGg -3' miRNA: 3'- uUCC-GGUGCCAGuG-GCUG--UGCCGGUu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 189665 | 0.67 | 0.681101 |
Target: 5'- -uGGCCgaGCGGUCGCCc---CGGCCGGg -3' miRNA: 3'- uuCCGG--UGCCAGUGGcuguGCCGGUU- -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 179783 | 0.67 | 0.690924 |
Target: 5'- uAGcGCC-CGGUCACCGucgucagguuccACACGGUCu- -3' miRNA: 3'- uUC-CGGuGCCAGUGGC------------UGUGCCGGuu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 14921 | 0.67 | 0.690924 |
Target: 5'- cGGGCuCGCGGUC-CCGACGugcucucgauCGGCUc- -3' miRNA: 3'- uUCCG-GUGCCAGuGGCUGU----------GCCGGuu -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 104490 | 0.67 | 0.690924 |
Target: 5'- -cGGCCACGGcgGCCGGguCGGgCGAg -3' miRNA: 3'- uuCCGGUGCCagUGGCUguGCCgGUU- -5' |
|||||||
11136 | 3' | -60.6 | NC_002794.1 | + | 116129 | 0.67 | 0.661349 |
Target: 5'- --cGCCGCGGcggCGgCGGCGgCGGCCAGg -3' miRNA: 3'- uucCGGUGCCa--GUgGCUGU-GCCGGUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home