miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
11288	5'	-53.3	NC_003083.1	+	72997	0.66	0.959028
	Target:  5'- aUGGuCUaccGCAGACGUCGAUCc-GCAGa -3' miRNA:   3'- gACC-GA---UGUUUGCAGCUGGacCGUCc -5'
11288	5'	-53.3	NC_003083.1	+	35240	0.67	0.921127
	Target:  5'- --uGCUGCAAuUGUCGugCUGGCu-- -3' miRNA:   3'- gacCGAUGUUuGCAGCugGACCGucc -5'
11288	5'	-53.3	NC_003083.1	+	1974	0.68	0.902756
	Target:  5'- -aGGCUGCGgcGACGcCGGCgUgcaccgacgacGGCAGGu -3' miRNA:   3'- gaCCGAUGU--UUGCaGCUGgA-----------CCGUCC- -5'
11288	5'	-53.3	NC_003083.1	+	72765	0.69	0.85706
	Target:  5'- -cGGCUGCGGcuucuucgguacguGCG-CGGCCUGcCAGGu -3' miRNA:   3'- gaCCGAUGUU--------------UGCaGCUGGACcGUCC- -5'
11288	5'	-53.3	NC_003083.1	+	114238	0.69	0.843197
	Target:  5'- -gGGCUGCGgcgcugcaccGGCGUCGugUUGuCAGGu -3' miRNA:   3'- gaCCGAUGU----------UUGCAGCugGACcGUCC- -5'
11288	5'	-53.3	NC_003083.1	+	96860	0.72	0.679502
	Target:  5'- -gGGCUACAuuuAGCGUauGCUUGGUGGGg -3' miRNA:   3'- gaCCGAUGU---UUGCAgcUGGACCGUCC- -5'
11288	5'	-53.3	NC_003083.1	+	76167	0.73	0.658516
	Target:  5'- gCUGGCaAC-AGCGUCuGuuCUGGCAGGc -3' miRNA:   3'- -GACCGaUGuUUGCAG-CugGACCGUCC- -5'
11288	5'	-53.3	NC_003083.1	+	72937	1.1	0.003668
	Target:  5'- uCUGGCUACAAACGUCGACCUGGCAGGc -3' miRNA:   3'- -GACCGAUGUUUGCAGCUGGACCGUCC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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