miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
1131	3'	-54.2	NC_000942.1	+	19881	0.66	0.582706
	Target:  5'- aUCGCCAucuCCgGCACcuuGGGGCAgcacaGUGGa -3' miRNA:   3'- -GGUGGUu--GG-CGUGu--CCCCGUag---UAUC- -5'
1131	3'	-54.2	NC_000942.1	+	12481	0.67	0.5373
	Target:  5'- aCCACCuccUCGUAgGGGGGCGgagCAUu- -3' miRNA:   3'- -GGUGGuu-GGCGUgUCCCCGUa--GUAuc -5'
1131	3'	-54.2	NC_000942.1	+	18731	0.67	0.515048
	Target:  5'- uCCACCAcuuGCCGgGcCAGGGGU-UCAa-- -3' miRNA:   3'- -GGUGGU---UGGCgU-GUCCCCGuAGUauc -5'
1131	3'	-54.2	NC_000942.1	+	30546	0.69	0.450793
	Target:  5'- aCAgCGACCGCACAGcaGGGaAUUGUAGc -3' miRNA:   3'- gGUgGUUGGCGUGUC--CCCgUAGUAUC- -5'
1131	3'	-54.2	NC_000942.1	+	24438	0.69	0.420352
	Target:  5'- uCgGCCAGCUGCA-AGGGcGCuUCGUAGc -3' miRNA:   3'- -GgUGGUUGGCGUgUCCC-CGuAGUAUC- -5'
1131	3'	-54.2	NC_000942.1	+	6418	0.71	0.336964
	Target:  5'- gUCAUuuaCGGCCGCAUAGGGGCAa----- -3' miRNA:   3'- -GGUG---GUUGGCGUGUCCCCGUaguauc -5'
1131	3'	-54.2	NC_000942.1	+	19472	0.83	0.047285
	Target:  5'- gCCACCaAACCGUcCAGGGGCcUCAUAGc -3' miRNA:   3'- -GGUGG-UUGGCGuGUCCCCGuAGUAUC- -5'
1131	3'	-54.2	NC_000942.1	+	19066	1.11	0.000433
	Target:  5'- uCCACCAACCGCACAGGGGCAUCAUAGa -3' miRNA:   3'- -GGUGGUUGGCGUGUCCCCGUAGUAUC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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