miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
11374	3'	-44.6	NC_003084.1	+	61147	0.66	0.999966
	Target:  5'- aCGAgagccugGUACAAGCGGucGUUCGgUg -3' miRNA:   3'- -GCUaaa----CAUGUUCGUCuuCAAGUgGu -5'
11374	3'	-44.6	NC_003084.1	+	41366	0.68	0.999674
	Target:  5'- gCGAcUUGUaucGCGAGUuuaauGAGGUUCACUg -3' miRNA:   3'- -GCUaAACA---UGUUCGu----CUUCAAGUGGu -5'
11374	3'	-44.6	NC_003084.1	+	87756	0.69	0.999168
	Target:  5'- gGAaacgUUGUACGAGCGGuuugaguuGGUUCGCa- -3' miRNA:   3'- gCUa---AACAUGUUCGUCu-------UCAAGUGgu -5'
11374	3'	-44.6	NC_003084.1	+	69777	0.69	0.998966
	Target:  5'- cCGAaUUGUACGAGUgugaaauGggGcUCGCCAu -3' miRNA:   3'- -GCUaAACAUGUUCGu------CuuCaAGUGGU- -5'
11374	3'	-44.6	NC_003084.1	+	35994	0.69	0.998725
	Target:  5'- ---gUUGUACucuGUAGAAGUUCGCg- -3' miRNA:   3'- gcuaAACAUGuu-CGUCUUCAAGUGgu -5'
11374	3'	-44.6	NC_003084.1	+	9335	0.7	0.998095
	Target:  5'- ----gUGUACGGGCgcccAGAGGUUCACa- -3' miRNA:   3'- gcuaaACAUGUUCG----UCUUCAAGUGgu -5'
11374	3'	-44.6	NC_003084.1	+	75795	0.76	0.927659
	Target:  5'- aCGAgcUGUACGAGCGGG---UCGCCAa -3' miRNA:   3'- -GCUaaACAUGUUCGUCUucaAGUGGU- -5'
11374	3'	-44.6	NC_003084.1	+	49611	1.11	0.019886
	Target:  5'- aCGAUUUGUACAAGCAGAAGUUCACCAc -3' miRNA:   3'- -GCUAAACAUGUUCGUCUUCAAGUGGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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