miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGaaa -5'
miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGaaa -5'
miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGAAA- -5'
miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGAAA- -5'
Results 81 - 84 of 84 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 11672 | 5' | -45.2 | NC_003102.1 | + | 25836 | 0.98 | 0.112468 |
|
Target: 5'- gAACGUGGCCGACUUUUCGUAAACa-- -3' miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGaaa -5' |
|||||||
| 11672 | 5' | -45.2 | NC_003102.1 | + | 97839 | 0.98 | 0.109237 |
|
Target: 5'- gAACGUGGCCGACUUUUCGUGAACg-- -3' miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGaaa -5' |
|||||||
| 11672 | 5' | -45.2 | NC_003102.1 | + | 76611 | 1.05 | 0.044709 |
|
Target: 5'- gAACGUGGCCGACUUUUCAUAAACUUUa -3' miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGAAA- -5' |
|||||||
| 11672 | 5' | -45.2 | NC_003102.1 | + | 104768 | 1.05 | 0.044709 |
|
Target: 5'- gAACGUGGCCGACUUUUCAUAAACUUUa -3' miRNA: 3'- -UUGCACCGGCUGAAAAGUAUUUGAAA- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home