miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12285	5'	-49.7	NC_003313.1	+	30804	0.66	0.790455
	Target:  5'- -gGCUGCUGAUUagcacacuggcgAUGGUGUGCggGCa -3' miRNA:   3'- uaUGACGGUUAAa-----------UACCGCACGa-CGa -5'
12285	5'	-49.7	NC_003313.1	+	11505	0.67	0.781682
	Target:  5'- --gUUGCCGAgcgUgcUGGCGUuucGCUGCg -3' miRNA:   3'- uauGACGGUUa--AauACCGCA---CGACGa -5'
12285	5'	-49.7	NC_003313.1	+	12257	0.67	0.770544
	Target:  5'- gGUGUUGCgGAUUUGuauUGuGCGUGCUGUg -3' miRNA:   3'- -UAUGACGgUUAAAU---AC-CGCACGACGa -5'
12285	5'	-49.7	NC_003313.1	+	92	0.67	0.770544
	Target:  5'- uUAUUGCCGuuucgAUGGUGUGUgGCg -3' miRNA:   3'- uAUGACGGUuaaa-UACCGCACGaCGa -5'
12285	5'	-49.7	NC_003313.1	+	30051	0.68	0.712525
	Target:  5'- ----cGCCAAUUUAgGGCGUcacccuuuaagcGCUGCa -3' miRNA:   3'- uaugaCGGUUAAAUaCCGCA------------CGACGa -5'
12285	5'	-49.7	NC_003313.1	+	9352	0.68	0.676416
	Target:  5'- ---aUGCCAGU--GUGGCGUGCcaucgugaUGCg -3' miRNA:   3'- uaugACGGUUAaaUACCGCACG--------ACGa -5'
12285	5'	-49.7	NC_003313.1	+	26799	0.68	0.676416
	Target:  5'- uUGCUGUgAAUUUcaugGGCGaGCUGCg -3' miRNA:   3'- uAUGACGgUUAAAua--CCGCaCGACGa -5'
12285	5'	-49.7	NC_003313.1	+	17623	1.07	0.001906
	Target:  5'- aAUACUGCCAAUUUAUGGCGUGCUGCUg -3' miRNA:   3'- -UAUGACGGUUAAAUACCGCACGACGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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