miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12518	3'	-52.5	NC_003345.1	+	58813	0.67	0.853485
	Target:  5'- aACGCCGUCGuguuCCGcaagcgucugaACgCGGCGGAGAu- -3' miRNA:   3'- -UGCGGCAGU----GGU-----------UGaGCCGUCUUUug -5'
12518	3'	-52.5	NC_003345.1	+	60183	0.71	0.684763
	Target:  5'- aACGCCG-CACCAGCacCGGCcauAGcGAGCa -3' miRNA:   3'- -UGCGGCaGUGGUUGa-GCCG---UCuUUUG- -5'
12518	3'	-52.5	NC_003345.1	+	67944	0.67	0.877683
	Target:  5'- -gGCUaUCgACCGACUCGgGCAGGAGGu -3' miRNA:   3'- ugCGGcAG-UGGUUGAGC-CGUCUUUUg -5'
12518	3'	-52.5	NC_003345.1	+	69827	0.66	0.892559
	Target:  5'- uCGUCGUCGCCGccgacgcagAUUCGGCA---AACg -3' miRNA:   3'- uGCGGCAGUGGU---------UGAGCCGUcuuUUG- -5'
12518	3'	-52.5	NC_003345.1	+	72852	0.66	0.899603
	Target:  5'- aACuUCGUCGCCGucuCUUGGUAGAGcGGCg -3' miRNA:   3'- -UGcGGCAGUGGUu--GAGCCGUCUU-UUG- -5'
12518	3'	-52.5	NC_003345.1	+	73542	0.67	0.853485
	Target:  5'- -gGCCGguaucacucCAUCGAgUCGGCAGAAcccGGCg -3' miRNA:   3'- ugCGGCa--------GUGGUUgAGCCGUCUU---UUG- -5'
12518	3'	-52.5	NC_003345.1	+	75290	0.67	0.885251
	Target:  5'- cCGCC-UCACCAGCagGGCuGAAc-- -3' miRNA:   3'- uGCGGcAGUGGUUGagCCGuCUUuug -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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