miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12588	5'	-50.6	NC_003345.1	+	63921	0.69	0.895967
	Target:  5'- uCGGAGUCG-UCUCGAAcaacGAGGUCGa -3' miRNA:   3'- -GCUUCGGCuGGAGCUUaac-UUCCAGC- -5'
12588	5'	-50.6	NC_003345.1	+	14573	0.69	0.8866
	Target:  5'- aCGGAGCgGcaaucuuCCUCGAAgccugcggcuaugcgGAAGGUCGa -3' miRNA:   3'- -GCUUCGgCu------GGAGCUUaa-------------CUUCCAGC- -5'
12588	5'	-50.6	NC_003345.1	+	4580	0.7	0.849176
	Target:  5'- uCGAGGUCGGCUUCGcuu---AGGUCGa -3' miRNA:   3'- -GCUUCGGCUGGAGCuuaacuUCCAGC- -5'
12588	5'	-50.6	NC_003345.1	+	1805	0.72	0.743792
	Target:  5'- gGAAGCU-ACCUCGAAUUGAcgAGGaUUGa -3' miRNA:   3'- gCUUCGGcUGGAGCUUAACU--UCC-AGC- -5'
12588	5'	-50.6	NC_003345.1	+	28595	0.73	0.701315
	Target:  5'- aGAAGCCGAggcgcugaaCCUCuGGUUGccGGUCGg -3' miRNA:   3'- gCUUCGGCU---------GGAGcUUAACuuCCAGC- -5'
12588	5'	-50.6	NC_003345.1	+	60661	0.74	0.646787
	Target:  5'- gGGuaguGCCGACCUCGAcUUuGAGGUUGa -3' miRNA:   3'- gCUu---CGGCUGGAGCUuAAcUUCCAGC- -5'
12588	5'	-50.6	NC_003345.1	+	4488	1.11	0.004008
	Target:  5'- gCGAAGCCGACCUCGAAUUGAAGGUCGg -3' miRNA:   3'- -GCUUCGGCUGGAGCUUAACUUCCAGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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