miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12783	3'	-56	NC_003387.1	+	44606	0.7	0.415274
	Target:  5'- gAGCGACgccgucggGCCGUggcgcgagcgUGUGGCCcUgGCCg -3' miRNA:   3'- -UUGCUGaa------CGGCA----------ACACCGGcAgCGG- -5'
12783	3'	-56	NC_003387.1	+	27403	0.7	0.396742
	Target:  5'- -cCGGgaUGCCGUUGgGGCCGUagcacacuggcUGCCa -3' miRNA:   3'- uuGCUgaACGGCAACaCCGGCA-----------GCGG- -5'
12783	3'	-56	NC_003387.1	+	39452	0.73	0.29729
	Target:  5'- -uCGACUUGCCcuugGUGGCC-UUGCCc -3' miRNA:   3'- uuGCUGAACGGcaa-CACCGGcAGCGG- -5'
12783	3'	-56	NC_003387.1	+	21683	0.74	0.248795
	Target:  5'- -uCGGCgccggUGCCGUgcUGGCCGcCGCCc -3' miRNA:   3'- uuGCUGa----ACGGCAacACCGGCaGCGG- -5'
12783	3'	-56	NC_003387.1	+	29629	0.75	0.212037
	Target:  5'- cAGCGGCUUGCCGUacaggaaUGU-GCUGUCgGCCu -3' miRNA:   3'- -UUGCUGAACGGCA-------ACAcCGGCAG-CGG- -5'
12783	3'	-56	NC_003387.1	+	32238	0.77	0.145423
	Target:  5'- cGCGACgagcugGCCGaccgccUGGCCGUCGCCg -3' miRNA:   3'- uUGCUGaa----CGGCaac---ACCGGCAGCGG- -5'
12783	3'	-56	NC_003387.1	+	47916	1.1	0.000635
	Target:  5'- gAACGACUUGCCGUUGUGGCCGUCGCCg -3' miRNA:   3'- -UUGCUGAACGGCAACACCGGCAGCGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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