miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12805	5'	-58	NC_003387.1	+	39205	0.7	0.356042
	Target:  5'- aCCAgGCC---CCCg---CGGUCGGGCa -3' miRNA:   3'- -GGUgCGGaacGGGaacaGCCAGCCCG- -5'
12805	5'	-58	NC_003387.1	+	24951	0.69	0.399036
	Target:  5'- gC-CGCCUgaugGCCUggGUCGGUUGGcaGCu -3' miRNA:   3'- gGuGCGGAa---CGGGaaCAGCCAGCC--CG- -5'
12805	5'	-58	NC_003387.1	+	15956	0.69	0.426377
	Target:  5'- cUCGCGCCUgcaUGUgCUUG-CGGuggaggacaauUCGGGCc -3' miRNA:   3'- -GGUGCGGA---ACGgGAACaGCC-----------AGCCCG- -5'
12805	5'	-58	NC_003387.1	+	28298	0.68	0.435735
	Target:  5'- gCACGCCUggGCaCCcc-UCGGUaucgCGGGCg -3' miRNA:   3'- gGUGCGGAa-CG-GGaacAGCCA----GCCCG- -5'
12805	5'	-58	NC_003387.1	+	37379	0.68	0.454801
	Target:  5'- -gGCGgCggcGCCCcgcUGUCGGuaUCGGGCa -3' miRNA:   3'- ggUGCgGaa-CGGGa--ACAGCC--AGCCCG- -5'
12805	5'	-58	NC_003387.1	+	42760	0.68	0.474308
	Target:  5'- gCUGCGCUggUGCCC----CGaGUCGGGCa -3' miRNA:   3'- -GGUGCGGa-ACGGGaacaGC-CAGCCCG- -5'
12805	5'	-58	NC_003387.1	+	12271	0.66	0.609183
	Target:  5'- cCCGCGCCUgGCgaCCggcgGcCGGaucagCGGGCc -3' miRNA:   3'- -GGUGCGGAaCG--GGaa--CaGCCa----GCCCG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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