miRNA display CGI

Results 1 - 7 of 7 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12903	3'	-61.8	NC_003387.1	+	52676	0.66	0.378548
	Target:  5'- -aGCGCGUUUgUgcaggucagcgaccCCUGG-GGGGGUGCc -3' miRNA:   3'- ggCGCGCGAA-A--------------GGACCaCCCCCGCGc -5'
12903	3'	-61.8	NC_003387.1	+	30752	0.67	0.317373
	Target:  5'- cCCGCcgGUGCga-CCgGGUcGGGGGCGUu -3' miRNA:   3'- -GGCG--CGCGaaaGGaCCA-CCCCCGCGc -5'
12903	3'	-61.8	NC_003387.1	+	31193	0.67	0.317373
	Target:  5'- -gGCgGCGCccaCCUGGcgcucGGGGGUGCGu -3' miRNA:   3'- ggCG-CGCGaaaGGACCa----CCCCCGCGC- -5'
12903	3'	-61.8	NC_003387.1	+	32262	0.67	0.317373
	Target:  5'- gCCGuCGC-CgaggCCgacaagGcGUGGGGGCGCGa -3' miRNA:   3'- -GGC-GCGcGaaa-GGa-----C-CACCCCCGCGC- -5'
12903	3'	-61.8	NC_003387.1	+	50407	0.68	0.275078
	Target:  5'- gCCGCGgGCgg-CCUGaaugaaGUcGGGGCGCa -3' miRNA:   3'- -GGCGCgCGaaaGGAC------CAcCCCCGCGc -5'
12903	3'	-61.8	NC_003387.1	+	46974	0.74	0.111374
	Target:  5'- gCCGUGCacgacgaccucggGCUgcgCCgcaGGUGGGGGCGCc -3' miRNA:   3'- -GGCGCG-------------CGAaa-GGa--CCACCCCCGCGc -5'
12903	3'	-61.8	NC_003387.1	+	9218	1.1	0.000198
	Target:  5'- cCCGCGCGCUUUCCUGGUGGGGGCGCGg -3' miRNA:   3'- -GGCGCGCGAAAGGACCACCCCCGCGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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