miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
13205	5'	-52.2	NC_003401.1	+	20875	0.66	0.974231
	Target:  5'- -gGUGUUUuuGGACGaGCCGUUUCCGUa- -3' miRNA:   3'- caCACGAG--UUUGC-CGGUAGAGGUAga -5'
13205	5'	-52.2	NC_003401.1	+	43600	0.66	0.971376
	Target:  5'- --aUGCUCuuaucGAgGGCCAUCUCuCGUUa -3' miRNA:   3'- cacACGAGu----UUgCCGGUAGAG-GUAGa -5'
13205	5'	-52.2	NC_003401.1	+	22856	0.67	0.944856
	Target:  5'- -cGUGCgUCAggUGGCUaaccacgccugGUUUCCGUCg -3' miRNA:   3'- caCACG-AGUuuGCCGG-----------UAGAGGUAGa -5'
13205	5'	-52.2	NC_003401.1	+	23714	0.68	0.935025
	Target:  5'- -cGUGCUCu-GCGGCCAcuaUCUUCGc-- -3' miRNA:   3'- caCACGAGuuUGCCGGU---AGAGGUaga -5'
13205	5'	-52.2	NC_003401.1	+	78056	0.69	0.892398
	Target:  5'- aUGUGCgUCGAccGCGGCCAg--CCAUUg -3' miRNA:   3'- cACACG-AGUU--UGCCGGUagaGGUAGa -5'
13205	5'	-52.2	NC_003401.1	+	125818	0.71	0.820043
	Target:  5'- ---gGUUCGAcgucGCGGCCGUCUCCAc-- -3' miRNA:   3'- cacaCGAGUU----UGCCGGUAGAGGUaga -5'
13205	5'	-52.2	NC_003401.1	+	7749	0.72	0.722381
	Target:  5'- -gGUGCUCGu-CGGCCggGUUUCCGUCc -3' miRNA:   3'- caCACGAGUuuGCCGG--UAGAGGUAGa -5'
13205	5'	-52.2	NC_003401.1	+	20750	1.07	0.006542
	Target:  5'- gGUGUGCUCAAACGGCCAUCUCCAUCUc -3' miRNA:   3'- -CACACGAGUUUGCCGGUAGAGGUAGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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