Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
13291 | 3' | -52.5 | NC_003409.1 | + | 133268 | 0.68 | 0.900423 |
Target: 5'- -aGCUggUCCAGCGGCuuGCc-AAGGGCc -3' miRNA: 3'- ucCGA--AGGUCGUCGugCGuuUUCUCG- -5' |
|||||||
13291 | 3' | -52.5 | NC_003409.1 | + | 51068 | 0.68 | 0.913301 |
Target: 5'- -cGCUcUCCGGC-GUAUGCAGGAGAacGCa -3' miRNA: 3'- ucCGA-AGGUCGuCGUGCGUUUUCU--CG- -5' |
|||||||
13291 | 3' | -52.5 | NC_003409.1 | + | 12501 | 0.68 | 0.925138 |
Target: 5'- cAGGC--CCAGUAGCAUGCG--GGuGUa -3' miRNA: 3'- -UCCGaaGGUCGUCGUGCGUuuUCuCG- -5' |
|||||||
13291 | 3' | -52.5 | NC_003409.1 | + | 103019 | 0.66 | 0.968864 |
Target: 5'- uAGGCUcuggCUAGCGGgcgcCugGCAGGgauGAGCc -3' miRNA: 3'- -UCCGAa---GGUCGUC----GugCGUUUu--CUCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home