miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
1355	3'	-63.6	NC_001335.1	+	295	0.72	0.110744
	Target:  5'- aGGCgcucaucuaaAGACCGGCCuugaaGGGCCGGUCAu -3' miRNA:   3'- gCCG----------UCUGGCCGGucg--UCUGGCCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	34415	0.73	0.086759
	Target:  5'- uCGGUGGAgUGGCCAGCGGcCCGcuGCCGu -3' miRNA:   3'- -GCCGUCUgGCCGGUCGUCuGGC--CGGU- -5'
1355	3'	-63.6	NC_001335.1	+	16202	0.73	0.089158
	Target:  5'- uCGGCAucguGGCCGGUCuGCuGGCCGGUCu -3' miRNA:   3'- -GCCGU----CUGGCCGGuCGuCUGGCCGGu -5'
1355	3'	-63.6	NC_001335.1	+	11513	0.76	0.054306
	Target:  5'- gGGCAcGACCGGCCAGaagaucccgcacUGGACCGGCg- -3' miRNA:   3'- gCCGU-CUGGCCGGUC------------GUCUGGCCGgu -5'
1355	3'	-63.6	NC_001335.1	+	5962	0.76	0.052818
	Target:  5'- aGGCAGACCaGGCCcgAGCgggucGGGCUGGCCu -3' miRNA:   3'- gCCGUCUGG-CCGG--UCG-----UCUGGCCGGu -5'
1355	3'	-63.6	NC_001335.1	+	44706	0.8	0.025485
	Target:  5'- aGGCAGAUCGuCCAGCAGaACUGGCCGu -3' miRNA:   3'- gCCGUCUGGCcGGUCGUC-UGGCCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	16289	1.08	0.000179
	Target:  5'- aCGGCAGACCGGCCAGCAGACCGGCCAc -3' miRNA:   3'- -GCCGUCUGGCCGGUCGUCUGGCCGGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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