miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
1355	3'	-63.6	NC_001335.1	+	9802	0.66	0.279861
	Target:  5'- aCGGCAccGCCGaaGCCA-CAG-CCGGCCAu -3' miRNA:   3'- -GCCGUc-UGGC--CGGUcGUCuGGCCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	17596	0.66	0.279861
	Target:  5'- uCGGCGGGauGGUCAGCGcAgCGGUCAa -3' miRNA:   3'- -GCCGUCUggCCGGUCGUcUgGCCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	27156	0.66	0.27317
	Target:  5'- aGGCGGACaGGCUcaGGguGGCggcaaGGCCGa -3' miRNA:   3'- gCCGUCUGgCCGG--UCguCUGg----CCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	5863	0.66	0.31527
	Target:  5'- aGGaucuGCgUGGCCAGCGGGCCGaGCUg -3' miRNA:   3'- gCCguc-UG-GCCGGUCGUCUGGC-CGGu -5'
1355	3'	-63.6	NC_001335.1	+	48381	0.66	0.286681
	Target:  5'- uGGCccacgccaagGGugUGGuUCGGCcGGCCGGCCGc -3' miRNA:   3'- gCCG----------UCugGCC-GGUCGuCUGGCCGGU- -5'
1355	3'	-63.6	NC_001335.1	+	14481	0.66	0.303583
	Target:  5'- uCGGCuGGugUGGCCgacgcucguccaaccGGUAGcACCGGuCCAg -3' miRNA:   3'- -GCCG-UCugGCCGG---------------UCGUC-UGGCC-GGU- -5'
1355	3'	-63.6	NC_001335.1	+	31800	0.66	0.307926
	Target:  5'- gCGGCAagccCCGGUCAGCcaGCCGGUUg -3' miRNA:   3'- -GCCGUcu--GGCCGGUCGucUGGCCGGu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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