Results 81 - 83 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
13964 | 3' | -57.9 | NC_003521.1 | + | 174208 | 0.66 | 0.938571 |
Target: 5'- gCCCACGuugGGGUCGcGcGGGUCgggcagggGCGCGuCGg -3' miRNA: 3'- -GGGUGC---UCCAGC-C-UCCAG--------UGCGCuGU- -5' |
|||||||
13964 | 3' | -57.9 | NC_003521.1 | + | 211337 | 0.66 | 0.938571 |
Target: 5'- uCCCGCGGgcgcgaguGGUUGG-GGUCcCGCaGCAg -3' miRNA: 3'- -GGGUGCU--------CCAGCCuCCAGuGCGcUGU- -5' |
|||||||
13964 | 3' | -57.9 | NC_003521.1 | + | 132430 | 0.66 | 0.942958 |
Target: 5'- -aCACGGGGUCGGGuuagCGUGCGGCGc -3' miRNA: 3'- ggGUGCUCCAGCCUcca-GUGCGCUGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home