Results 81 - 84 of 84 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
14547 | 5' | -53 | NC_003521.1 | + | 224434 | 0.67 | 0.984078 |
Target: 5'- uGCGUGGUGGGCGagc---GGUCCAg -3' miRNA: 3'- cCGCACCACUUGCcauuuaCCGGGUg -5' |
|||||||
14547 | 5' | -53 | NC_003521.1 | + | 86614 | 0.67 | 0.985816 |
Target: 5'- -uCGUGGUG-GCGGUAGAgcaggaaGCCCAg -3' miRNA: 3'- ccGCACCACuUGCCAUUUac-----CGGGUg -5' |
|||||||
14547 | 5' | -53 | NC_003521.1 | + | 32193 | 0.67 | 0.985816 |
Target: 5'- uGCG-GGUcGGGCauGGUGggGAUGGCUCGCa -3' miRNA: 3'- cCGCaCCA-CUUG--CCAU--UUACCGGGUG- -5' |
|||||||
14547 | 5' | -53 | NC_003521.1 | + | 224822 | 0.66 | 0.992432 |
Target: 5'- gGGCGUcugcGGcuGGCGGUAGAUGGaCUCGg -3' miRNA: 3'- -CCGCA----CCacUUGCCAUUUACC-GGGUg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home