Results 61 - 80 of 184 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 77959 | 0.67 | 0.971673 |
Target: 5'- uGCUGGGucuuggaGCC-GGCCGcGGGCucGCCg -3' miRNA: 3'- uCGACCUua-----UGGuUCGGUaCCCG--UGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 16685 | 0.67 | 0.968774 |
Target: 5'- cGGCUGGGAcGCCuucaCCAUGuGGCAg- -3' miRNA: 3'- -UCGACCUUaUGGuuc-GGUAC-CCGUgg -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 93219 | 0.67 | 0.962356 |
Target: 5'- cAGUUcGggUACCA--CC-UGGGCACCu -3' miRNA: 3'- -UCGAcCuuAUGGUucGGuACCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 1352 | 0.67 | 0.962356 |
Target: 5'- cGGCUGGG--GCUGAacgcGCCGcGGGcCACCg -3' miRNA: 3'- -UCGACCUuaUGGUU----CGGUaCCC-GUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 174213 | 0.67 | 0.97688 |
Target: 5'- cGUUGGggUcGCgCGGGUCGggcagGGGCGCg -3' miRNA: 3'- uCGACCuuA-UG-GUUCGGUa----CCCGUGg -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 8349 | 0.67 | 0.971673 |
Target: 5'- aAGCUGGggUAgCGcucgcAGCCAgagaagaaaaacUGGGUgguCCa -3' miRNA: 3'- -UCGACCuuAUgGU-----UCGGU------------ACCCGu--GG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 87076 | 0.67 | 0.971673 |
Target: 5'- gGGCuguacgUGGAuUGgUggGCCAcggUGGGCAUCg -3' miRNA: 3'- -UCG------ACCUuAUgGuuCGGU---ACCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 224586 | 0.67 | 0.964699 |
Target: 5'- aGGCUGaGGUacauuucgcacucgGCCAGGCgGcaGGGCGCCg -3' miRNA: 3'- -UCGACcUUA--------------UGGUUCGgUa-CCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 91189 | 0.67 | 0.962356 |
Target: 5'- -uCUGGAagcgGUACCGcgggcgcGUCGUGGGCACa -3' miRNA: 3'- ucGACCU----UAUGGUu------CGGUACCCGUGg -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 113741 | 0.67 | 0.962356 |
Target: 5'- gGGCUGGGccGCCucucgucgguGGCCcUGcccGGCACCg -3' miRNA: 3'- -UCGACCUuaUGGu---------UCGGuAC---CCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 97745 | 0.68 | 0.942455 |
Target: 5'- cGGCUGcGAAU-CCGAcguaucGCCAccGGCGCCa -3' miRNA: 3'- -UCGAC-CUUAuGGUU------CGGUacCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 216111 | 0.68 | 0.958825 |
Target: 5'- -cCUGGGgugacgacAUACCcuGAGUCAUGGGUAUCc -3' miRNA: 3'- ucGACCU--------UAUGG--UUCGGUACCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 87403 | 0.68 | 0.958825 |
Target: 5'- cGGCUGcugcugACCAcGCCgGUGGcGCACCu -3' miRNA: 3'- -UCGACcuua--UGGUuCGG-UACC-CGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 24822 | 0.68 | 0.945145 |
Target: 5'- uGCUGGugggcuucuacACCA--CCAUGGGCAUCa -3' miRNA: 3'- uCGACCuua--------UGGUucGGUACCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 17639 | 0.68 | 0.946892 |
Target: 5'- cGCUGcGGAgcUACguAcGCCAgcaccgGGGCACCa -3' miRNA: 3'- uCGAC-CUU--AUGguU-CGGUa-----CCCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 226378 | 0.68 | 0.958825 |
Target: 5'- cGGCUGacgccGCCGcagGGCCGUGuGCACCa -3' miRNA: 3'- -UCGACcuua-UGGU---UCGGUACcCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 130405 | 0.68 | 0.958825 |
Target: 5'- uGCUGGAGUugCAgaagcucuggcuGGgCGUGGaGUAUCa -3' miRNA: 3'- uCGACCUUAugGU------------UCgGUACC-CGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 239631 | 0.68 | 0.958825 |
Target: 5'- cAGCUGGuccuguugGCaCAGGCCGUccagucccguagGcGGCGCCg -3' miRNA: 3'- -UCGACCuua-----UG-GUUCGGUA------------C-CCGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 225068 | 0.68 | 0.958825 |
Target: 5'- uAGCUcGGGcAUGCUgcuGCCcgGGcGCACCu -3' miRNA: 3'- -UCGA-CCU-UAUGGuu-CGGuaCC-CGUGG- -5' |
|||||||
14575 | 3' | -53.7 | NC_003521.1 | + | 121902 | 0.68 | 0.958825 |
Target: 5'- uGGCUGGGGcagaugGCCcGGCCcGUGGGguugugcacguuCACCg -3' miRNA: 3'- -UCGACCUUa-----UGGuUCGG-UACCC------------GUGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home