miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
14615	3'	-60.3	NC_003521.1	+	82632	0.66	0.855708
	Target:  5'- aCACGCCGCcGG--AgGAGGGcGUCCGc -3' miRNA:   3'- gGUGCGGCGaCCcgUgCUUCC-CAGGU- -5'
14615	3'	-60.3	NC_003521.1	+	83702	0.66	0.825179
	Target:  5'- aCGCGCgaGC-GGGCGucCaAGGGGUCCAg -3' miRNA:   3'- gGUGCGg-CGaCCCGU--GcUUCCCAGGU- -5'
14615	3'	-60.3	NC_003521.1	+	13472	0.66	0.816333
	Target:  5'- -aGCGCCGUcgacggucUGGGCgACGGggaacguGGGGUCUu -3' miRNA:   3'- ggUGCGGCG--------ACCCG-UGCU-------UCCCAGGu -5'
14615	3'	-60.3	NC_003521.1	+	155283	0.66	0.817144
	Target:  5'- gCC-CGUCGCUGGGCaACGccauGGGcUUCGg -3' miRNA:   3'- -GGuGCGGCGACCCG-UGCuu--CCC-AGGU- -5'
14615	3'	-60.3	NC_003521.1	+	141211	0.66	0.825179
	Target:  5'- gCUGCGCCGCcGGGCGCugcaGGUCa- -3' miRNA:   3'- -GGUGCGGCGaCCCGUGcuucCCAGgu -5'
14615	3'	-60.3	NC_003521.1	+	198768	0.66	0.825179
	Target:  5'- gUCGCGCCGCucgUGGGCGaGguGGGUagCAg -3' miRNA:   3'- -GGUGCGGCG---ACCCGUgCuuCCCAg-GU- -5'
14615	3'	-60.3	NC_003521.1	+	155653	0.66	0.862909
	Target:  5'- -aGCGCCguGCUGGGUggcgGCGGAG-GUCUg -3' miRNA:   3'- ggUGCGG--CGACCCG----UGCUUCcCAGGu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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