miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
14615	5'	-54.7	NC_003521.1	+	111276	0.66	0.97548
	Target:  5'- --gGGCCCGcCGUGCcagcgCCGCCGCGa-- -3' miRNA:   3'- ucaUCGGGUaGUACG-----GGUGGUGCaug -5'
14615	5'	-54.7	NC_003521.1	+	47515	0.66	0.97548
	Target:  5'- ----cCCCAcCGUGCCCACCACc--- -3' miRNA:   3'- ucaucGGGUaGUACGGGUGGUGcaug -5'
14615	5'	-54.7	NC_003521.1	+	110786	0.66	0.97548
	Target:  5'- cGUGGCCa--CGUGCCCcuCCAUG-ACg -3' miRNA:   3'- uCAUCGGguaGUACGGGu-GGUGCaUG- -5'
14615	5'	-54.7	NC_003521.1	+	112011	0.66	0.97548
	Target:  5'- --gAGCCCcaccgggaaaacGUUcugcgGUGCCCcgACCGCGUACu -3' miRNA:   3'- ucaUCGGG------------UAG-----UACGGG--UGGUGCAUG- -5'
14615	5'	-54.7	NC_003521.1	+	149569	0.66	0.97548
	Target:  5'- cGGUuuCCCGccCGUGCCCAuCUACGUGg -3' miRNA:   3'- -UCAucGGGUa-GUACGGGU-GGUGCAUg -5'
14615	5'	-54.7	NC_003521.1	+	109234	0.66	0.976467
	Target:  5'- cGUGGCUCucggugcgcgugaugAUCAggcucugGCCCACCAcCGUGg -3' miRNA:   3'- uCAUCGGG---------------UAGUa------CGGGUGGU-GCAUg -5'
14615	5'	-54.7	NC_003521.1	+	75116	0.66	0.976467
	Target:  5'- aGGUGGCCCGcacgguggacggcuuUCGgcgGCCgACCugGg-- -3' miRNA:   3'- -UCAUCGGGU---------------AGUa--CGGgUGGugCaug -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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