Results 101 - 107 of 107 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 138047 | 0.68 | 0.921917 |
|
Target: 5'- --cGGCgCCGUCAUcgcgcagccgcugccGCuCUACCGCGUGCa -3' miRNA: 3'- ucaUCG-GGUAGUA---------------CG-GGUGGUGCAUG- -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 205778 | 0.68 | 0.914012 |
|
Target: 5'- uGGUGGCgCCGcacggcaugagCGUGCCCaACCGCGUcCg -3' miRNA: 3'- -UCAUCG-GGUa----------GUACGGG-UGGUGCAuG- -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 49872 | 0.69 | 0.910485 |
|
Target: 5'- aAGU-GCCCAUCAuccgUcgucuccccuacgucGCCCGCUACGUAa -3' miRNA: 3'- -UCAuCGGGUAGU----A---------------CGGGUGGUGCAUg -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 163411 | 0.69 | 0.908087 |
|
Target: 5'- cGUGGcCCCGUCGucggcugccgcUGCCUACCAgGgUGCc -3' miRNA: 3'- uCAUC-GGGUAGU-----------ACGGGUGGUgC-AUG- -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 63406 | 0.69 | 0.908087 |
|
Target: 5'- gGGUAGUCgAguuuaCGgggaagcgGCCCGCCGCGUAUa -3' miRNA: 3'- -UCAUCGGgUa----GUa-------CGGGUGGUGCAUG- -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 203366 | 0.69 | 0.901931 |
|
Target: 5'- cGGUGGCCCGcgcgCGaGCCCACaGCGUcACc -3' miRNA: 3'- -UCAUCGGGUa---GUaCGGGUGgUGCA-UG- -5' |
|||||||
| 14615 | 5' | -54.7 | NC_003521.1 | + | 166271 | 0.74 | 0.658391 |
|
Target: 5'- ---cGCCC-UCAgacauacuUGUCCACCACGUACg -3' miRNA: 3'- ucauCGGGuAGU--------ACGGGUGGUGCAUG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home