Results 81 - 88 of 88 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 14751 | 0.68 | 0.560199 |
|
Target: 5'- cGGGCCGgCCgcggCCGGGGCGcGccuUCGuGGCCg -3' miRNA: 3'- -CUCGGCaGG----GGUCCCGCuC---AGC-CCGG- -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 93947 | 0.68 | 0.550103 |
|
Target: 5'- -cGCCGucgucuggcuuccUCCUCuGGGCGGGagGGGCg -3' miRNA: 3'- cuCGGC-------------AGGGGuCCCGCUCagCCCGg -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 38186 | 0.68 | 0.550103 |
|
Target: 5'- gGGGCCGcUCCCAGugcucgcGGuCGAgGUCGGGCa -3' miRNA: 3'- -CUCGGCaGGGGUC-------CC-GCU-CAGCCCGg -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 87719 | 0.68 | 0.540974 |
|
Target: 5'- -uGCCGUCgcgcgcgCCCGGcGGCGuGgUGGGCCc -3' miRNA: 3'- cuCGGCAG-------GGGUC-CCGCuCaGCCCGG- -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 156887 | 0.68 | 0.532801 |
|
Target: 5'- cGGCCGcUgCCCgauggcacggGGGGCGA--CGGGCCg -3' miRNA: 3'- cUCGGC-AgGGG----------UCCCGCUcaGCCCGG- -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 211331 | 0.69 | 0.497058 |
|
Target: 5'- aGGCgGUCCCgCGGGcGCGAGUgguugGGGUCc -3' miRNA: 3'- cUCGgCAGGG-GUCC-CGCUCAg----CCCGG- -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 194574 | 0.69 | 0.488289 |
|
Target: 5'- -cGCCa--CCgAGGGCGAcGUCGaGGCCg -3' miRNA: 3'- cuCGGcagGGgUCCCGCU-CAGC-CCGG- -5' |
|||||||
| 14633 | 3' | -64.2 | NC_003521.1 | + | 212687 | 0.84 | 0.055051 |
|
Target: 5'- -cGCCGUCgCCAGGGCaaggcugguGGGUCGGGCCu -3' miRNA: 3'- cuCGGCAGgGGUCCCG---------CUCAGCCCGG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home