Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
1537 | 3' | -62.9 | NC_001347.2 | + | 180470 | 0.66 | 0.702258 |
Target: 5'- --gCUCCGUUcgCGCAGCGCCCUGGg -3' miRNA: 3'- uggGGGGCAGagGCGUUGUGGGGCCg -5' |
|||||||
1537 | 3' | -62.9 | NC_001347.2 | + | 51568 | 0.66 | 0.702258 |
Target: 5'- gGCCCCgCGgggUCUCCuucgcGCAACAuUCCUGGUc -3' miRNA: 3'- -UGGGGgGC---AGAGG-----CGUUGU-GGGGCCG- -5' |
|||||||
1537 | 3' | -62.9 | NC_001347.2 | + | 229225 | 0.66 | 0.747804 |
Target: 5'- -aCCCCCGUCcCCGgcccCAACACCguCCcGCa -3' miRNA: 3'- ugGGGGGCAGaGGC----GUUGUGG--GGcCG- -5' |
|||||||
1537 | 3' | -62.9 | NC_001347.2 | + | 135123 | 0.66 | 0.702258 |
Target: 5'- gGCCCaCCGUCgaccCCG-AGCGCuUCCGGCc -3' miRNA: 3'- -UGGGgGGCAGa---GGCgUUGUG-GGGCCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home