miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
15664	3'	-59.5	NC_004065.1	+	68137	0.66	0.855037
	Target:  5'- gGGUCUgucggacgAGCUGgacGCGGUgaUCGCGGCgGc -3' miRNA:   3'- gUCAGA--------UCGAU---CGCCG--AGCGCCGgCa -5'
15664	3'	-59.5	NC_004065.1	+	31376	0.66	0.847473
	Target:  5'- gAGUCUgaucGGCcGGCGGaucCUCuCGGCCGg -3' miRNA:   3'- gUCAGA----UCGaUCGCC---GAGcGCCGGCa -5'
15664	3'	-59.5	NC_004065.1	+	69470	0.66	0.831811
	Target:  5'- -uGUCgcgccGGCU-GCGGUaCGCGGCCa- -3' miRNA:   3'- guCAGa----UCGAuCGCCGaGCGCCGGca -5'
15664	3'	-59.5	NC_004065.1	+	68768	0.66	0.823727
	Target:  5'- gCGG-CgguGCUGGCGGCcuUCaaGGCCGUg -3' miRNA:   3'- -GUCaGau-CGAUCGCCG--AGcgCCGGCA- -5'
15664	3'	-59.5	NC_004065.1	+	169576	0.66	0.815482
	Target:  5'- -uGUUgccGCUGucGCGGCUC-CGGCCGg -3' miRNA:   3'- guCAGau-CGAU--CGCCGAGcGCCGGCa -5'
15664	3'	-59.5	NC_004065.1	+	120619	0.66	0.815482
	Target:  5'- -cGagUAGCUcGUGGCguccgcCGCGGCCGa -3' miRNA:   3'- guCagAUCGAuCGCCGa-----GCGCCGGCa -5'
15664	3'	-59.5	NC_004065.1	+	184902	0.66	0.815482
	Target:  5'- uCGGgagCgGGCgcccgGGUGGCUCgggaGCGGCCGg -3' miRNA:   3'- -GUCa--GaUCGa----UCGCCGAG----CGCCGGCa -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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