miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
15666	3'	-52	NC_004065.1	+	20722	0.68	0.98554
	Target:  5'- gACUGAAgGAGGcccggccGGCugcuGGCGGGCGUGc -3' miRNA:   3'- gUGGCUUgCUCU-------UCGu---CUGCUCGUAC- -5'
15666	3'	-52	NC_004065.1	+	20381	0.66	0.994279
	Target:  5'- -cCCGAACGAGAGGUu--CGAGgGUc -3' miRNA:   3'- guGGCUUGCUCUUCGucuGCUCgUAc -5'
15666	3'	-52	NC_004065.1	+	19415	0.66	0.996238
	Target:  5'- cCGCCGGcgucggcggagguGCcGGAGGCAccgcgcugcuggcGAUGAGCGUGg -3' miRNA:   3'- -GUGGCU-------------UGcUCUUCGU-------------CUGCUCGUAC- -5'
15666	3'	-52	NC_004065.1	+	19132	0.7	0.94801
	Target:  5'- gGCCGuucgGgGGGGAGCGGGCGuGCcgGg -3' miRNA:   3'- gUGGCu---UgCUCUUCGUCUGCuCGuaC- -5'
15666	3'	-52	NC_004065.1	+	7449	1.09	0.010539
	Target:  5'- gCACCGAACGAGAAGCAGACGAGCAUGa -3' miRNA:   3'- -GUGGCUUGCUCUUCGUCUGCUCGUAC- -5'
15666	3'	-52	NC_004065.1	+	6524	0.67	0.992431
	Target:  5'- uUACCGuccGCGGGGAuGCGGACGGccGCGa- -3' miRNA:   3'- -GUGGCu--UGCUCUU-CGUCUGCU--CGUac -5'
15666	3'	-52	NC_004065.1	+	3803	0.67	0.987327
	Target:  5'- -uCCGGAUGAGGAGaugcugcggaAGAUGAGCGa- -3' miRNA:   3'- guGGCUUGCUCUUCg---------UCUGCUCGUac -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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