miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
15666	3'	-52	NC_004065.1	+	141207	0.68	0.98394
	Target:  5'- gCGCCG-ACGAcAGGCAGAuCGcGCGUGc -3' miRNA:   3'- -GUGGCuUGCUcUUCGUCU-GCuCGUAC- -5'
15666	3'	-52	NC_004065.1	+	74959	0.68	0.98571
	Target:  5'- uGCCGAAgGGGAAGUggaAGACGAacugguGCAg- -3' miRNA:   3'- gUGGCUUgCUCUUCG---UCUGCU------CGUac -5'
15666	3'	-52	NC_004065.1	+	59566	0.68	0.98571
	Target:  5'- aGCCGAugGCGAcGGGCAG-CGAcugcGCAUGg -3' miRNA:   3'- gUGGCU--UGCUcUUCGUCuGCU----CGUAC- -5'
15666	3'	-52	NC_004065.1	+	196500	0.68	0.98571
	Target:  5'- gCGCCGAACGuGucgauGACGAGCAg- -3' miRNA:   3'- -GUGGCUUGCuCuucguCUGCUCGUac -5'
15666	3'	-52	NC_004065.1	+	3803	0.67	0.987327
	Target:  5'- -uCCGGAUGAGGAGaugcugcggaAGAUGAGCGa- -3' miRNA:   3'- guGGCUUGCUCUUCg---------UCUGCUCGUac -5'
15666	3'	-52	NC_004065.1	+	69229	0.67	0.987327
	Target:  5'- uCGCUGAACGAGAucaagGGCGuGAagaugcugaaGAGCGUGc -3' miRNA:   3'- -GUGGCUUGCUCU-----UCGU-CUg---------CUCGUAC- -5'
15666	3'	-52	NC_004065.1	+	19415	0.66	0.996238
	Target:  5'- cCGCCGGcgucggcggagguGCcGGAGGCAccgcgcugcuggcGAUGAGCGUGg -3' miRNA:   3'- -GUGGCU-------------UGcUCUUCGU-------------CUGCUCGUAC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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