miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
15672	3'	-57	NC_004065.1	+	88674	0.75	0.486759
	Target:  5'- cGACGGCGGCgggcuccgcuGCCggcggUGGCGGCUCGGc -3' miRNA:   3'- -CUGUCGCCG----------UGGaa---GCUGCUGAGCCa -5'
15672	3'	-57	NC_004065.1	+	21735	0.76	0.433191
	Target:  5'- aACAGCGGCACCUgcgUGugGAacUUCGGa -3' miRNA:   3'- cUGUCGCCGUGGAa--GCugCU--GAGCCa -5'
15672	3'	-57	NC_004065.1	+	168557	0.76	0.433191
	Target:  5'- uGGCAGCGGCGgCggCGGCGACagCGGg -3' miRNA:   3'- -CUGUCGCCGUgGaaGCUGCUGa-GCCa -5'
15672	3'	-57	NC_004065.1	+	97853	0.77	0.407723
	Target:  5'- cGGCGGCGGCcuCCUUCGACGugUUGc- -3' miRNA:   3'- -CUGUCGCCGu-GGAAGCUGCugAGCca -5'
15672	3'	-57	NC_004065.1	+	109199	0.79	0.319275
	Target:  5'- cGGCGGCGGCGCCUcggccucuuccugcUCGGCGACgggagacggcggCGGUa -3' miRNA:   3'- -CUGUCGCCGUGGA--------------AGCUGCUGa-----------GCCA- -5'
15672	3'	-57	NC_004065.1	+	113956	0.8	0.282355
	Target:  5'- cGGCGGCGGCAgCggCGACGGCgUCGGg -3' miRNA:   3'- -CUGUCGCCGUgGaaGCUGCUG-AGCCa -5'
15672	3'	-57	NC_004065.1	+	18956	1.08	0.004503
	Target:  5'- cGACAGCGGCACCUUCGACGACUCGGUg -3' miRNA:   3'- -CUGUCGCCGUGGAAGCUGCUGAGCCA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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