miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
1583	5'	-58.3	NC_001347.2	+	102457	0.71	0.60752
	Target:  5'- cGCGUacGaCGCgAGGUCCCGC-GCACGg- -3' miRNA:   3'- aCGCA--C-GCG-UCCAGGGCGuUGUGCag -5'
1583	5'	-58.3	NC_001347.2	+	136156	0.72	0.558672
	Target:  5'- aGCGgGCGCAGcGUgcggaCCGCAGCACGg- -3' miRNA:   3'- aCGCaCGCGUC-CAg----GGCGUUGUGCag -5'
1583	5'	-58.3	NC_001347.2	+	155982	0.72	0.587886
	Target:  5'- cGCG-GCGUauccucaaguuGGGUCCCaGCGagcuGCGCGUCa -3' miRNA:   3'- aCGCaCGCG-----------UCCAGGG-CGU----UGUGCAG- -5'
1583	5'	-58.3	NC_001347.2	+	221187	0.73	0.510993
	Target:  5'- aGCGUGCGUguacGGUCCuCGCAggugGCACGg- -3' miRNA:   3'- aCGCACGCGu---CCAGG-GCGU----UGUGCag -5'
1583	5'	-58.3	NC_001347.2	+	173700	0.74	0.474104
	Target:  5'- gGCG-GCGguGGUUCCGguACGCGg- -3' miRNA:   3'- aCGCaCGCguCCAGGGCguUGUGCag -5'
1583	5'	-58.3	NC_001347.2	+	37935	0.75	0.404662
	Target:  5'- cGCGgcGCGCGGGUgCagguGCAGCGCGUCc -3' miRNA:   3'- aCGCa-CGCGUCCAgGg---CGUUGUGCAG- -5'
1583	5'	-58.3	NC_001347.2	+	183686	1.1	0.00237
	Target:  5'- cUGCGUGCGCAGGUCCCGCAACACGUCg -3' miRNA:   3'- -ACGCACGCGUCCAGGGCGUUGUGCAG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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