Results 21 - 40 of 198 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 161825 | 0.66 | 0.998077 |
Target: 5'- aCGGaCGGAcGGGCGggCG-GACGGgGACg -3' miRNA: 3'- -GUC-GUCU-UCUGCuaGCaCUGCUgCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 211325 | 0.66 | 0.997718 |
Target: 5'- aCAGCGGcaccuucGACGAcUCG-GugGugGGCg -3' miRNA: 3'- -GUCGUCuu-----CUGCU-AGCaCugCugCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 57373 | 0.66 | 0.997867 |
Target: 5'- gAGCGacaguuuccuucuccGGAGcucGCGGUCGUcACGGCGGCa -3' miRNA: 3'- gUCGU---------------CUUC---UGCUAGCAcUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 72116 | 0.66 | 0.99683 |
Target: 5'- uGGacaGGAGGACGGUgGacGCGGCGAUg -3' miRNA: 3'- gUCg--UCUUCUGCUAgCacUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 144060 | 0.66 | 0.997718 |
Target: 5'- aAGCAGuuggccuuguGGCGcGUCGagGACGGCGAUg -3' miRNA: 3'- gUCGUCuu--------CUGC-UAGCa-CUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 138702 | 0.66 | 0.997867 |
Target: 5'- aAGC---GGGCGAUCGUGGagcgguccucagguuCGugGACa -3' miRNA: 3'- gUCGucuUCUGCUAGCACU---------------GCugCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 121138 | 0.66 | 0.998077 |
Target: 5'- gAGCAGGAGAgGA-CGUGcgcuAUGugGAa -3' miRNA: 3'- gUCGUCUUCUgCUaGCAC----UGCugCUg -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 86795 | 0.66 | 0.997718 |
Target: 5'- uUAGC-GAAGACGggCGcGGCGaacGCGGCc -3' miRNA: 3'- -GUCGuCUUCUGCuaGCaCUGC---UGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 128572 | 0.66 | 0.997718 |
Target: 5'- gCAGCGGcAG-CGA-CGUcGGCGGCGAa -3' miRNA: 3'- -GUCGUCuUCuGCUaGCA-CUGCUGCUg -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 61636 | 0.66 | 0.997718 |
Target: 5'- uCGGUcuGGAugAGACGGUUGgcgcuggaGACGAUGGCg -3' miRNA: 3'- -GUCG--UCU--UCUGCUAGCa-------CUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 98108 | 0.66 | 0.996231 |
Target: 5'- -uGCGGguGACGAUCGaagGcaacucgaaccagGCGGCGGCg -3' miRNA: 3'- guCGUCuuCUGCUAGCa--C-------------UGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 198775 | 0.66 | 0.99683 |
Target: 5'- -cGCAG-AGACGAUCG-GAC-ACGGu -3' miRNA: 3'- guCGUCuUCUGCUAGCaCUGcUGCUg -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 52836 | 0.66 | 0.998043 |
Target: 5'- cCGGUAGggGAgagccgaCGAUCcUGuCGACGAg -3' miRNA: 3'- -GUCGUCuuCU-------GCUAGcACuGCUGCUg -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 23362 | 0.66 | 0.997718 |
Target: 5'- gUAGCGGAAcccuGCGGUCccGACGAUGAa -3' miRNA: 3'- -GUCGUCUUc---UGCUAGcaCUGCUGCUg -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 61234 | 0.66 | 0.998043 |
Target: 5'- gAGCAGAGGGCGGagaggaaggCGUcgaaggccugcgcGGCGuCGACg -3' miRNA: 3'- gUCGUCUUCUGCUa--------GCA-------------CUGCuGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 8749 | 0.66 | 0.996289 |
Target: 5'- ----cGGAGGCcGUgGUGGCGGCGGCa -3' miRNA: 3'- gucguCUUCUGcUAgCACUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 48094 | 0.67 | 0.992337 |
Target: 5'- -cGCGGAccuguGGCGGcggCgGUGGCGGCGGCg -3' miRNA: 3'- guCGUCUu----CUGCUa--G-CACUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 37333 | 0.67 | 0.994197 |
Target: 5'- aCGGCAGcauaACGAUCGaGGCGAagaCGACa -3' miRNA: 3'- -GUCGUCuuc-UGCUAGCaCUGCU---GCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 88727 | 0.67 | 0.994521 |
Target: 5'- gAGCGGcGGAUGAgcacguccaccagcuUgGUGGCGAUGAUg -3' miRNA: 3'- gUCGUCuUCUGCU---------------AgCACUGCUGCUG- -5' |
|||||||
15856 | 3' | -51.6 | NC_004065.1 | + | 141981 | 0.67 | 0.99498 |
Target: 5'- ----cGGAGGCGAcggCGaUGACGACGAUa -3' miRNA: 3'- gucguCUUCUGCUa--GC-ACUGCUGCUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home