Results 81 - 100 of 116 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 30706 | 0.7 | 0.723452 |
Target: 5'- -cGACgUCgaGGUGGCGGACGCguugAACGAc -3' miRNA: 3'- ucCUG-AGg-CCGCCGCCUGUGa---UUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 83448 | 0.7 | 0.731937 |
Target: 5'- cGGGCUCCGGCacgaGCGGcaccuuacccgcgACGCcGACGAu -3' miRNA: 3'- uCCUGAGGCCGc---CGCC-------------UGUGaUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 99658 | 0.7 | 0.76969 |
Target: 5'- uGGAgaagCCGGCGGCGcGGCGCcGACa- -3' miRNA: 3'- uCCUga--GGCCGCCGC-CUGUGaUUGcu -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 78856 | 0.7 | 0.76969 |
Target: 5'- aAGGGCggCCGGCGcgccagcucGCGGuCGCcGACGAu -3' miRNA: 3'- -UCCUGa-GGCCGC---------CGCCuGUGaUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 120395 | 0.7 | 0.760635 |
Target: 5'- cAGGACgcccucgaCGGUGGUGGGCACc-GCGGc -3' miRNA: 3'- -UCCUGag------GCCGCCGCCUGUGauUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 101812 | 0.7 | 0.760635 |
Target: 5'- -cGACUUCGGCGGUGGcgGgACUGGCa- -3' miRNA: 3'- ucCUGAGGCCGCCGCC--UgUGAUUGcu -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 79616 | 0.7 | 0.751475 |
Target: 5'- cGGACccgCUGcGCGcGCGGACGCU-GCGGg -3' miRNA: 3'- uCCUGa--GGC-CGC-CGCCUGUGAuUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 28884 | 0.7 | 0.74222 |
Target: 5'- gAGGACUgCUGGCgccccgagucGGCGGACAa-GGCGGa -3' miRNA: 3'- -UCCUGA-GGCCG----------CCGCCUGUgaUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 66645 | 0.7 | 0.732876 |
Target: 5'- -cGGCUUCGGCgcGGUGGGCGCccGGCGAg -3' miRNA: 3'- ucCUGAGGCCG--CCGCCUGUGa-UUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 145419 | 0.71 | 0.675416 |
Target: 5'- -aGACUCuCGGCGGCGG-CGCUuagggaaucGCGAu -3' miRNA: 3'- ucCUGAG-GCCGCCGCCuGUGAu--------UGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 48096 | 0.71 | 0.675416 |
Target: 5'- cGGACcuguggCGGCGGCGGugGCggcGGCGGu -3' miRNA: 3'- uCCUGag----GCCGCCGCCugUGa--UUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 82132 | 0.71 | 0.66568 |
Target: 5'- -uGACguaUCCGGCGGCgcGGACGCUGuaccuccugGCGAg -3' miRNA: 3'- ucCUG---AGGCCGCCG--CCUGUGAU---------UGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 200851 | 0.71 | 0.704397 |
Target: 5'- uGGAgUUCGGCGucgacgggggcGCGGGCGgUGGCGAa -3' miRNA: 3'- uCCUgAGGCCGC-----------CGCCUGUgAUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 36118 | 0.71 | 0.66568 |
Target: 5'- cGGGGCcgcugCCGGCGGCGG-UugUggUGGu -3' miRNA: 3'- -UCCUGa----GGCCGCCGCCuGugAuuGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 161826 | 0.71 | 0.713956 |
Target: 5'- cGGACggaCgGGCgGGCGGACGggGACGGg -3' miRNA: 3'- uCCUGa--GgCCG-CCGCCUGUgaUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 139873 | 0.71 | 0.685119 |
Target: 5'- cGGAg-CCGGCGGCaGGACG--GACGAg -3' miRNA: 3'- uCCUgaGGCCGCCG-CCUGUgaUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 184803 | 0.71 | 0.704397 |
Target: 5'- gAGGACggugacgcaaCGGUGGCGGugGCggcAGCGGc -3' miRNA: 3'- -UCCUGag--------GCCGCCGCCugUGa--UUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 68754 | 0.71 | 0.694782 |
Target: 5'- cGGACUCgGacaucGCGGCGG-UGCUGGCGGc -3' miRNA: 3'- uCCUGAGgC-----CGCCGCCuGUGAUUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 109658 | 0.71 | 0.713956 |
Target: 5'- -cGACUCCGGCaGGguccucCGGGCGCUcuccGACGAc -3' miRNA: 3'- ucCUGAGGCCG-CC------GCCUGUGA----UUGCU- -5' |
|||||||
15928 | 5' | -57.7 | NC_004065.1 | + | 168977 | 0.72 | 0.626563 |
Target: 5'- cGGugUCCGucagcGCGGCGGAC-CUcggaGGCGAc -3' miRNA: 3'- uCCugAGGC-----CGCCGCCUGuGA----UUGCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home